Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.biosynthesis.pyruvate family.pyruvate-derived amino acids.leucine.3-isopropylmalate dehydrogenase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-4 1 CH_aar_194 2 2 0.000273698
Arabidopsis lyrata scaffold_2 1 CH_aly_355 2 2 0.000396027
Brassica carinata ChrC03 1 CH_bca_226 3 5 0.0000000685398
Brassica carinata ChrB05 1 CH_bca_784 2 2 0.000213764
Brassica napus A02 1 CH_bna_222 3 4 0.000000247782
Brassica napus C02 1 CH_bna_223 3 4 0.000000247782
Brassica oleracea C2 1 CH_bol_77 3 3 0.000000016026
Brassica rapa A02 1 CH_bra_87 3 4 0.000000110583
Cicer arietinum L. Ca_LG1_v3 1 CH_car_204 2 3 0.000233481
Capsella rubella scaffold_2 1 CH_cru_314 2 2 0.000219346
Erythranthe guttata scaffold_9 1 CH_egut_277 2 2 0.0000728147
Schrenkiella parvula ch5-7 1 CH_spa_250 2 2 0.000472404
Trochodendron aralioides group1 1 CH_tar_471 2 3 0.000540303
Aethionema arabicum LG-4 2 CH_aar_194 2 2 0.000273698
Arabidopsis lyrata scaffold_2 2 CH_aly_355 2 2 0.000396027
Brassica carinata ChrC03 2 CH_bca_226 3 5 0.0000000685398
Brassica carinata ChrB05 2 CH_bca_784 2 2 0.000213764
Brassica oleracea C2 2 CH_bol_77 3 3 0.000000016026
Brassica rapa A02 2 CH_bra_87 3 4 0.000000110583
Cicer arietinum L. Ca_LG1_v3 2 CH_car_204 2 3 0.000233481
Capsella rubella scaffold_2 2 CH_cru_314 2 2 0.000219346
Erythranthe guttata scaffold_9 2 CH_egut_277 2 2 0.0000728147
Schrenkiella parvula ch5-7 2 CH_spa_250 2 2 0.000472404
Trochodendron aralioides group1 2 CH_tar_471 2 3 0.000540303

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001