Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.biosynthesis.pyruvate family.pyruvate-derived amino acids.leucine.isopropylmalate isomerase heterodimer.large subunit

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr4 1 CH_acertr_380 2 3 0.000211484
Carpinus fangiana Cfa06 1 CH_cfa_212 2 2 0.0000757346
Carya illinoinensis Chr02 1 CH_cil_511 2 3 0.000557817
Durio zibethinus NW_019167904.1 1 CH_dzi_187 2 2 0.0000463489
Erigeron canadensis Conyza_canadensis_scaffold:9 1 CH_eca_252 2 2 0.0000448722
Fragaria x ananassa Fvb4-1 1 CH_fan_390 2 2 0.000111022
Gossypium raimondii Chr06 1 CH_gra_288 2 2 0.000160832
Helianthus annuus HanXRQChr14 1 CH_han_490 2 2 0.000115929
Lonicera japonica GWHAAZE00000003 1 CH_lonja_152 3 3 0.00000000537991
Manihot esculenta Chromosome03 1 CH_mes_347 2 2 0.000183189
Nicotiana tabacum Nitab4.5_0001041 1 CH_nta_131 2 2 0.000329182
Rosa chinensis RcHm_v2.0_Chr4 1 CH_rch_563 2 2 0.000119596
Solanum tuberosum ST4.03ch09 1 CH_stu_450 2 2 0.000153736
Theobroma cacao Chromosome_4 1 CH_tca_275 2 2 0.0000732386
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_203 2 2 0.0000929238
Acer truncatum chr4 2 CH_acertr_380 2 3 0.000211484
Carpinus fangiana Cfa06 2 CH_cfa_212 2 2 0.0000757346
Carya illinoinensis Chr02 2 CH_cil_511 2 3 0.000557817
Durio zibethinus NW_019167904.1 2 CH_dzi_187 2 2 0.0000463489
Erigeron canadensis Conyza_canadensis_scaffold:9 2 CH_eca_252 2 2 0.0000448722
Fragaria x ananassa Fvb4-1 2 CH_fan_390 2 2 0.000111022
Gossypium hirsutum A09 2 CH_ghi_664 2 2 0.000400523
Gossypium hirsutum D09 2 CH_ghi_665 2 2 0.000400523
Gossypium raimondii Chr06 2 CH_gra_288 2 2 0.000160832
Helianthus annuus HanXRQChr14 2 CH_han_490 2 2 0.000115929
Lonicera japonica GWHAAZE00000003 2 CH_lonja_152 3 3 0.00000000537991
Manihot esculenta Chromosome03 2 CH_mes_347 2 2 0.000183189
Nicotiana tabacum Nitab4.5_0001041 2 CH_nta_131 2 2 0.000329182
Rosa chinensis RcHm_v2.0_Chr4 2 CH_rch_563 2 2 0.000119596
Solanum tuberosum ST4.03ch09 2 CH_stu_450 2 2 0.000153736
Theobroma cacao Chromosome_4 2 CH_tca_275 2 2 0.0000732386
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_203 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001