Functional clusters
Information
- Type MapMan
- Description Cell wall organisation.hemicellulose.xylan.modification and degradation
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Amaranthus hybridus | AmaHy_arrow1_Scaffold_12 | 1 | CH_amhyb_250 | 4 | 54 | 0.000555853 |
Amaranthus hybridus | AmaHy_arrow1_Scaffold_12 | 2 | CH_amhyb_250 | 4 | 54 | 0.000555853 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
21.2.2.2.1 | Cell wall organisation.hemicellulose.xylan.modification and degradation.O-acetyltransferase (RWA) | 17 |
21.2.2.2.2 | Cell wall organisation.hemicellulose.xylan.modification and degradation.xylan O-acetyltransferase (XOAT) | 117 |
21.2.2.2.3 | Cell wall organisation.hemicellulose.xylan.modification and degradation.glucuronoxylan 4-O-methyltransferase | 8 |
21.2.2.2.4 | Cell wall organisation.hemicellulose.xylan.modification and degradation.endo-beta-1,4-xylanase | 29 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |