Functional clusters

Information

  • Type MapMan
  • Description Cell wall organisation.hemicellulose.xylan.modification and degradation

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_12 1 CH_amhyb_250 4 54 0.000555853
Amaranthus hybridus AmaHy_arrow1_Scaffold_12 2 CH_amhyb_250 4 54 0.000555853

Available child term results

Ontology identifier Description Number of clusters
21.2.2.2.1 Cell wall organisation.hemicellulose.xylan.modification and degradation.O-acetyltransferase (RWA) 17
21.2.2.2.2 Cell wall organisation.hemicellulose.xylan.modification and degradation.xylan O-acetyltransferase (XOAT) 117
21.2.2.2.3 Cell wall organisation.hemicellulose.xylan.modification and degradation.glucuronoxylan 4-O-methyltransferase 8
21.2.2.2.4 Cell wall organisation.hemicellulose.xylan.modification and degradation.endo-beta-1,4-xylanase 29

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001