Functional clusters

Information

  • Type MapMan
  • Description Cell wall organisation.hemicellulose.xylan.modification and degradation.O-acetyltransferase (RWA)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica oleracea C4 1 CH_bol_380 2 2 0.000490292
Corylus avellana 1 1 CH_cav_447 2 3 0.000689981
Davidia involucrata GWHABJS00000016 1 CH_din_465 2 2 0.000500125
Physcomitrium patens Chr13 1 CH_ppa_231 2 2 0.000367636
Quercus lobata 6 1 CH_qlo_938 2 3 0.00046464
Striga asiatica scaffold1 1 CH_sas_111 2 2 0.000375223
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_365 2 2 0.000557543
Vanilla planifolia CM028154.1 1 CH_vpl_260 2 2 0.000221664
Brassica oleracea C4 2 CH_bol_380 2 2 0.000490292
Corylus avellana 1 2 CH_cav_447 2 3 0.000689981
Davidia involucrata GWHABJS00000016 2 CH_din_465 2 2 0.000500125
Lotus japonicus chr4 2 CH_lja_317 2 2 0.000214523
Physcomitrium patens Chr13 2 CH_ppa_231 2 2 0.000367636
Quercus lobata 6 2 CH_qlo_938 2 3 0.00046464
Striga asiatica scaffold1 2 CH_sas_111 2 2 0.000375223
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_365 2 2 0.000557543
Vanilla planifolia CM028154.1 2 CH_vpl_260 2 2 0.000221664

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001