Functional clusters
Information
- Type MapMan
- Description RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.RNA helicase activities
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr13 | 1 | CH_acertr_513 | 3 | 12 | 0.000467805 |
| Ceratophyllum demersum | 4 | 1 | CH_cde_260 | 3 | 10 | 0.000626926 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 1 | CH_vma_162 | 3 | 5 | 0.00000453182 |
| Acer truncatum | chr13 | 2 | CH_acertr_513 | 3 | 12 | 0.000467805 |
| Ceratophyllum demersum | 4 | 2 | CH_cde_260 | 3 | 10 | 0.000626926 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 2 | CH_vma_162 | 3 | 5 | 0.00000453182 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| 16.2.7.1.1 | RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.RNA helicase activities.RNA helicase (Sub2) | 12 |
| 16.2.7.1.3 | RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.RNA helicase activities.RNA helicase (Prp28) | 8 |
| 16.2.7.1.4 | RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.RNA helicase activities.RNA helicase (Brr2) | 22 |
| 16.2.7.1.5 | RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.RNA helicase activities.RNA helicase (Prp2) | 6 |
| 16.2.7.1.6 | RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.RNA helicase activities.RNA helicase (Prp16) | 2 |
| 16.2.7.1.7 | RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.RNA helicase activities.RNA helicase (Prp22) | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |