Functional clusters

Information

  • Type MapMan
  • Description RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.RNA helicase activities.RNA helicase (Sub2)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_6 1 CH_aly_225 2 2 0.0000660044
Arabidopsis thaliana Chr5 1 CH_ath_418 2 8 0.000802108
Brassica carinata ChrC03 1 CH_bca_194 3 3 0.0000000239902
Brassica carinata ChrC04 1 CH_bca_918 2 2 0.000448905
Capsella rubella scaffold_6 1 CH_cru_306 2 3 0.000219338
Oryza sativa ssp. japonica chr01 1 CH_osa_203 2 2 0.0000528123
Arabidopsis lyrata scaffold_6 2 CH_aly_225 2 2 0.0000660044
Arabidopsis thaliana Chr5 2 CH_ath_418 2 8 0.000802108
Brassica carinata ChrC03 2 CH_bca_194 3 3 0.0000000239902
Brassica carinata ChrC04 2 CH_bca_918 2 2 0.000448905
Capsella rubella scaffold_6 2 CH_cru_306 2 3 0.000219338
Oryza sativa ssp. japonica chr01 2 CH_osa_203 2 2 0.0000528123

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001