Functional clusters

Information

  • Type MapMan
  • Description RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.RNA helicase activities.RNA helicase (Prp28)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB06 1 CH_bca_849 2 2 0.000320646
Erigeron canadensis Conyza_canadensis_scaffold:8 1 CH_eca_344 2 2 0.000134617
Lonicera japonica GWHAAZE00000001 1 CH_lonja_302 3 12 0.0000118278
Lactuca sativa Lsat_1_v8_lg_3 1 CH_lsa_375 2 3 0.000154198
Brassica carinata ChrB06 2 CH_bca_849 2 2 0.000320646
Erigeron canadensis Conyza_canadensis_scaffold:8 2 CH_eca_344 2 2 0.000134617
Lonicera japonica GWHAAZE00000001 2 CH_lonja_302 3 12 0.0000118278
Lactuca sativa Lsat_1_v8_lg_3 2 CH_lsa_375 2 3 0.000154198

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001