Functional clusters

Information

  • Type MapMan
  • Description Cell cycle organisation.DNA replication

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Vigna mungo CM024072.1 1 CH_vmu_412 5 33 0.00075012
Vigna mungo CM024072.1 2 CH_vmu_412 5 33 0.00075012

Available child term results

Ontology identifier Description Number of clusters
13.2.1.1.1 Cell cycle organisation.DNA replication.preinitiation.origin recognition complex.component ORC1 4
13.2.1.1.2 Cell cycle organisation.DNA replication.preinitiation.origin recognition complex.component ORC2 2
13.2.1.1.3 Cell cycle organisation.DNA replication.preinitiation.origin recognition complex.component ORC3 12
13.2.1.1.4 Cell cycle organisation.DNA replication.preinitiation.origin recognition complex.component ORC4 6
13.2.1.1.5 Cell cycle organisation.DNA replication.preinitiation.origin recognition complex.component ORC5 7
13.2.1.1.6 Cell cycle organisation.DNA replication.preinitiation.origin recognition complex.component ORC6 12
13.2.1.2.1 Cell cycle organisation.DNA replication.preinitiation.MCM replicative DNA helicase complex.component MCM2 2
13.2.1.2.2 Cell cycle organisation.DNA replication.preinitiation.MCM replicative DNA helicase complex.component MCM3 5
13.2.1.2.3 Cell cycle organisation.DNA replication.preinitiation.MCM replicative DNA helicase complex.component MCM4 2
13.2.1.2.5 Cell cycle organisation.DNA replication.preinitiation.MCM replicative DNA helicase complex.component MCM6 2
13.2.1.2.7 Cell cycle organisation.DNA replication.preinitiation.MCM replicative DNA helicase complex.associated component ETG1 6
13.2.1.2.8 Cell cycle organisation.DNA replication.preinitiation.MCM replicative DNA helicase complex.associated component BICE1 10
13.2.1.3 Cell cycle organisation.DNA replication.preinitiation.helicase auxiliary factor (CDT1) 26
13.2.1.4 Cell cycle organisation.DNA replication.preinitiation.helicase loading factor (CDC6) 4
13.2.1.5 Cell cycle organisation.DNA replication.preinitiation.DNA topoisomerase (TOP1) 27
13.2.1.6 Cell cycle organisation.DNA replication.preinitiation.DNA topoisomerase (TOP2) 4
13.2.1.7 Cell cycle organisation.DNA replication.preinitiation.chromatin stabilizing factor (TSK) 6
13.2.2 Cell cycle organisation.DNA replication.initiation 2
13.2.2.1 Cell cycle organisation.DNA replication.initiation.auxiliary factor (CDC45) 6
13.2.2.2.2 Cell cycle organisation.DNA replication.initiation.MCM8-9 auxiliary complex.component MCM9 4
13.2.2.3 Cell cycle organisation.DNA replication.initiation.CDC45-recruitment factor (MCM10) 4
13.2.2.4 Cell cycle organisation.DNA replication.initiation.replicated DNA checkpoint protein (TopBP1) 6
13.2.2.5.1 Cell cycle organisation.DNA replication.initiation.GINS DNA replication fork maintenance complex.component PSF1 6
13.2.2.5.4 Cell cycle organisation.DNA replication.initiation.GINS DNA replication fork maintenance complex.component SLD5 4
13.2.3.1 Cell cycle organisation.DNA replication.elongation.DNA polymerase alpha complex 2
13.2.3.1.1 Cell cycle organisation.DNA replication.elongation.DNA polymerase alpha complex.catalytic component POLA1 10
13.2.3.1.2 Cell cycle organisation.DNA replication.elongation.DNA polymerase alpha complex.replication fork tethering component POLA2 4
13.2.3.1.3 Cell cycle organisation.DNA replication.elongation.DNA polymerase alpha complex.primase component POLA3 4
13.2.3.1.4 Cell cycle organisation.DNA replication.elongation.DNA polymerase alpha complex.primase component POLA4 10
13.2.3.2.2 Cell cycle organisation.DNA replication.elongation.DNA polymerase delta complex.component POLD2 10
13.2.3.2.3 Cell cycle organisation.DNA replication.elongation.DNA polymerase delta complex.component POLD3 9
13.2.3.2.4 Cell cycle organisation.DNA replication.elongation.DNA polymerase delta complex.component POLD4 8
13.2.3.3 Cell cycle organisation.DNA replication.elongation.DNA polymerase epsilon complex 2
13.2.3.3.1 Cell cycle organisation.DNA replication.elongation.DNA polymerase epsilon complex.catalytic component POL2/POLE1 22
13.2.3.3.2 Cell cycle organisation.DNA replication.elongation.DNA polymerase epsilon complex.non-catalytic component Dpb2 6
13.2.3.3.3 Cell cycle organisation.DNA replication.elongation.DNA polymerase epsilon complex.non-catalytic component Dpb4 4
13.2.3.4.1 Cell cycle organisation.DNA replication.elongation.DNA-tracking platform.sliding clamp protein (PCNA) 8
13.2.3.4.2 Cell cycle organisation.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex 4
13.2.3.4.2.1 Cell cycle organisation.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.component RFC1 10
13.2.3.4.2.2 Cell cycle organisation.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.component RFC2 2
13.2.3.4.2.3 Cell cycle organisation.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.component RFC3 3
13.2.3.4.2.4 Cell cycle organisation.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.component RFC4 2
13.2.3.4.2.5 Cell cycle organisation.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.component RFC5 2
13.2.3.5.1 Cell cycle organisation.DNA replication.elongation.single-stranded-DNA binding RPA complex.component RPA1 2
13.2.3.5.2 Cell cycle organisation.DNA replication.elongation.single-stranded-DNA binding RPA complex.component RPA2 2
13.2.4.1.1 Cell cycle organisation.DNA replication.maturation.ribonuclease H2 complex.subunit A 2
13.2.4.1.2 Cell cycle organisation.DNA replication.maturation.ribonuclease H2 complex.subunit B 8
13.2.4.1.3 Cell cycle organisation.DNA replication.maturation.ribonuclease H2 complex.subunit C 8
13.2.4.2 Cell cycle organisation.DNA replication.maturation.flap structure-specific endonuclease (FEN1) 6
13.2.4.3 Cell cycle organisation.DNA replication.maturation.DNA ligase (LIG1) 7
13.2.4.4 Cell cycle organisation.DNA replication.maturation.auxiliary factor (JHS1/DNA2) 2
13.2.5.1 Cell cycle organisation.DNA replication.telomere replication.telomerase ribonucleoprotein complex 2
13.2.5.1.1 Cell cycle organisation.DNA replication.telomere replication.telomerase ribonucleoprotein complex.reverse transcriptase protein component TERT 12
13.2.5.1.2 Cell cycle organisation.DNA replication.telomere replication.telomerase ribonucleoprotein complex.associated component POT 11
13.2.5.1.3 Cell cycle organisation.DNA replication.telomere replication.telomerase ribonucleoprotein complex.associated TERT:POT-interacting component ARM 8
13.2.5.2.1 Cell cycle organisation.DNA replication.telomere replication.telomere integrity maintenance complex.component STN1 1
13.2.5.2.2 Cell cycle organisation.DNA replication.telomere replication.telomere integrity maintenance complex.component TEN1 4
13.2.5.2.3 Cell cycle organisation.DNA replication.telomere replication.telomere integrity maintenance complex.component CTC1 14
13.2.5.3 Cell cycle organisation.DNA replication.telomere replication.telomeric dsDNA-binding protein 2
13.2.6.1.2 Cell cycle organisation.DNA replication.endoreduplication.somatic DNA topoisomerase VI complex.subunit TOP6B 17

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001