Functional clusters

Information

  • Type MapMan
  • Description Cell cycle organisation.DNA replication.elongation.DNA polymerase epsilon complex.catalytic component POL2/POLE1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_8 1 CH_amhyb_126 2 2 0.0000841751
Amborella trichopoda AmTr_v1.0_scaffold00040 1 CH_atr_172 2 2 0.0000794407
Chara braunii BFEA01000140 1 CH_cbr_62 2 2 0.0000719269
Ceratophyllum demersum 1 1 CH_cde_17 3 3 0.00000000935703
Carya illinoinensis Chr13 1 CH_cil_345 2 2 0.0000619828
Cucumis melo chr09 1 CH_cme_226 2 2 0.000200133
Carica papaya supercontig_32 1 CH_cpa_33 3 3 0.000000013557
Helianthus annuus HanXRQChr09 1 CH_han_500 2 2 0.000115929
Lactuca sativa Lsat_1_v8_lg_6 1 CH_lsa_373 2 3 0.000154198
Oryza sativa ssp. japonica chr02 1 CH_osa_202 2 2 0.0000528123
Petunia axillaris Peaxi162Scf00544 1 CH_pax_59 3 3 0.00000000742514
Amaranthus hybridus AmaHy_arrow1_Scaffold_8 2 CH_amhyb_126 2 2 0.0000841751
Amborella trichopoda AmTr_v1.0_scaffold00040 2 CH_atr_172 2 2 0.0000794407
Chara braunii BFEA01000140 2 CH_cbr_62 2 2 0.0000719269
Ceratophyllum demersum 1 2 CH_cde_17 3 3 0.00000000935703
Carya illinoinensis Chr13 2 CH_cil_345 2 2 0.0000619828
Cucumis melo chr09 2 CH_cme_226 2 2 0.000200133
Carica papaya supercontig_32 2 CH_cpa_33 3 3 0.000000013557
Helianthus annuus HanXRQChr09 2 CH_han_500 2 2 0.000115929
Lactuca sativa Lsat_1_v8_lg_6 2 CH_lsa_373 2 3 0.000154198
Oryza sativa ssp. japonica chr02 2 CH_osa_202 2 2 0.0000528123
Petunia axillaris Peaxi162Scf00544 2 CH_pax_59 3 3 0.00000000742514

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001