Functional clusters

Information

  • Type MapMan
  • Description Cell cycle organisation.DNA replication.preinitiation.DNA topoisomerase (TOP1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group9 1 CH_ach_196 2 2 0.000325928
Arabidopsis lyrata scaffold_8 1 CH_aly_237 2 2 0.0000660044
Arabidopsis thaliana Chr5 1 CH_ath_261 2 3 0.0000859463
Brassica carinata ChrC03 1 CH_bca_1169 2 2 0.000961939
Brassica carinata ChrC09 1 CH_bca_1170 2 2 0.000961939
Brassica oleracea C2 1 CH_bol_307 2 2 0.000196117
Cardamine hirsuta Chr8 1 CH_chi_369 2 2 0.000414723
Capsella rubella scaffold_8 1 CH_cru_396 2 3 0.000657999
Eutrema salsugineum scaffold_2 1 CH_esa_180 2 2 0.0000761499
Medicago truncatula chr3 1 CH_mtr_402 3 14 0.0000036854
Punica granatum NC_045133.1 1 CH_pgr_263 2 3 0.000225098
Papaver somniferum NC_039362.1 1 CH_pso_136 4 11 0.000000000395819
Schrenkiella parvula ch6-6 1 CH_spa_226 2 2 0.000236202
Selenicereus undatus Scaffold_33680 1 CH_sun_207 2 2 0.000217992
Actinidia chinensis Lachesis_group9 2 CH_ach_196 2 2 0.000325928
Arabidopsis lyrata scaffold_8 2 CH_aly_237 2 2 0.0000660044
Arabidopsis thaliana Chr5 2 CH_ath_261 2 3 0.0000859463
Brassica carinata ChrC03 2 CH_bca_1169 2 2 0.000961939
Brassica carinata ChrC09 2 CH_bca_1170 2 2 0.000961939
Brassica oleracea C2 2 CH_bol_307 2 2 0.000196117
Cardamine hirsuta Chr8 2 CH_chi_369 2 2 0.000414723
Capsella rubella scaffold_8 2 CH_cru_396 2 3 0.000657999
Eutrema salsugineum scaffold_2 2 CH_esa_180 2 2 0.0000761499
Punica granatum NC_045133.1 2 CH_pgr_263 2 3 0.000225098
Papaver somniferum NC_039362.1 2 CH_pso_136 4 11 0.000000000395819
Schrenkiella parvula ch6-6 2 CH_spa_226 2 2 0.000236202
Selenicereus undatus Scaffold_33680 2 CH_sun_207 2 2 0.000217992

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001