Functional clusters

Information

  • Type MapMan
  • Description Cell cycle organisation.DNA replication.preinitiation.helicase auxiliary factor (CDT1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_4 1 CH_aly_320 2 2 0.000198013
Brassica rapa A04 1 CH_bra_269 2 3 0.000257588
Chara braunii BFEA01000247 1 CH_cbr_99 2 3 0.000215773
Capsella rubella scaffold_4 1 CH_cru_330 2 2 0.000219346
Davidia involucrata GWHABJS00000019 1 CH_din_426 2 2 0.000300075
Malus domestica Chr10 1 CH_mdo_743 2 2 0.000796344
Medicago truncatula chr6 1 CH_mtr_429 3 11 0.00000835173
Nicotiana tabacum Nitab4.5_0000326 1 CH_nta_145 2 2 0.000329182
Physcomitrium patens Chr19 1 CH_ppa_246 2 2 0.000367636
Simmondsia chinensis GWHAASQ00000010 1 CH_sci_259 2 2 0.000510856
Simmondsia chinensis GWHAASQ00000005 1 CH_sci_260 2 2 0.000510856
Sequoiadendron giganteum chr10 1 CH_sgi_478 3 6 0.0000000355966
Vigna mungo CM024072.1 1 CH_vmu_298 2 2 0.000193842
Arabidopsis lyrata scaffold_4 2 CH_aly_320 2 2 0.000198013
Brassica rapa A04 2 CH_bra_269 2 3 0.000257588
Chara braunii BFEA01000247 2 CH_cbr_99 2 3 0.000215773
Capsella rubella scaffold_4 2 CH_cru_330 2 2 0.000219346
Davidia involucrata GWHABJS00000019 2 CH_din_426 2 2 0.000300075
Eucalyptus grandis Chr11 2 CH_egr_880 2 3 0.000526721
Malus domestica Chr10 2 CH_mdo_743 2 2 0.000796344
Nicotiana tabacum Nitab4.5_0000326 2 CH_nta_145 2 2 0.000329182
Physcomitrium patens Chr19 2 CH_ppa_246 2 2 0.000367636
Simmondsia chinensis GWHAASQ00000010 2 CH_sci_259 2 2 0.000510856
Simmondsia chinensis GWHAASQ00000005 2 CH_sci_260 2 2 0.000510856
Sequoiadendron giganteum chr10 2 CH_sgi_478 3 6 0.0000000355966
Vigna mungo CM024072.1 2 CH_vmu_298 2 2 0.000193842

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001