Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p21480 Brassica napus
Aa31LG4G7790 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_196.1 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2946 Anthoceros agrestis
Actinidia03490 Actinidia chinensis
Actinidia29453 Actinidia chinensis
Ah.16g110130 Amaranthus hybridus
AL2G37890 Arabidopsis lyrata
Aqoxy5G01889 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.K9S7A3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WDY3M6 Arachis hypogaea
AT1G77680 Arabidopsis thaliana
ATR0118G017 Amborella trichopoda
Atru.chr13.1405 Acer truncatum
AUR62023366 Chenopodium quinoa
AUR62023635 Chenopodium quinoa
BcaB05g25066 Brassica carinata
BcaC03g15759 Brassica carinata
BraA02t07171Z Brassica rapa
C02p34960 Brassica napus
CAN.G2.38 Capsicum annuum
CANSAT25G3401 Cannabis sativa
CARHR071180 Cardamine hirsuta
CARHR071190 Cardamine hirsuta
Carub.0002s2456 Capsella rubella
Ca_03727_v3 Cicer arietinum L.
CBR_g3977 Chara braunii
Cc10_g11030 Coffea canephora
CDE10G0831 Ceratophyllum demersum
Cfa015986 Carpinus fangiana
Ciclev10000093m.g Citrus clementina
CiPaw.05G224900 Carya illinoinensis
ClCG08G005400 Citrullus lanatus
COL.COLO4_12189 Corchorus olitorius
Cpa.g.sc36.27 Carica papaya
Cre03.g208100 Chlamydomonas reinhardtii
CsaV3_6G003580 Cucumis sativus L.
CSS0002228 Camellia sinensis var. sinensis
CSS0010638 Camellia sinensis var. sinensis
CSS0020512 Camellia sinensis var. sinensis
CSS0021720 Camellia sinensis var. sinensis
DCAR_014108 Daucus carota
DCAR_017392 Daucus carota
Dinv27341 Davidia involucrata
Duzib041G0044 Durio zibethinus
Duzib116G0213 Durio zibethinus
ECA246G1773 Erigeron canadensis
EL10Ac1g00012 Beta vulgaris
Eucgr.F03766 Eucalyptus grandis
FAN15G1193 Fragaria x ananassa
FAN20G0685 Fragaria x ananassa
FAN24G2028 Fragaria x ananassa
FAN27G0108 Fragaria x ananassa
FvH4_2g26510 Fragaria vesca
Glyma.13G082100 Glycine max
Glyma.14G163000 Glycine max
Gohir.A05G233200 Gossypium hirsutum
Gohir.D05G235600 Gossypium hirsutum
Gorai.009G243900 Gossypium raimondii
GSVIVG01008904001 Vitis vinifera
HanXRQChr08g0229271 Helianthus annuus
Haze_00483 Corylus avellana
Hund20425 Selenicereus undatus
Hund27040 Selenicereus undatus
Lalb_Chr10g0101931 Lupinus albus
Lalb_Chr17g0343881 Lupinus albus
Lj1g0016472 Lotus japonicus
Lj4A611G30 Lonicera japonica
Lj4A612G15 Lonicera japonica
Lj4A612G16 Lonicera japonica
Lj4A612T12 Lonicera japonica
Lsat_1_v5_gn_6_111060 Lactuca sativa
Manes.18G075000 Manihot esculenta
Mapoly0010s0091 Marchantia polymorpha
Mapoly0058s0075 Marchantia polymorpha
MBI02_g08719_MAGBIO Magnolia biondii
MCO05G187 Micromonas commoda
MD08G1168200 Malus domestica
MD15G1353600 Malus domestica
Medtr5g058810 Medicago truncatula
Medtr5g059080 Medicago truncatula
MELO3C011578.2 Cucumis melo
Migut.C01152 Erythranthe guttata
MSTRG.24155 Avicennia marina
Nitab4.5_0001926g0080 Nicotiana tabacum
Nitab4.5_0004554g0020 Nicotiana tabacum
Nn1g08696 Nelumbo nucifera
Nn5g28158 Nelumbo nucifera
Oeu050895.1 Olea europaea
Os02g0754100 Oryza sativa ssp. japonica
Peaxi162Scf00051g00722 Petunia axillaris
Peaxi162Scf00160g00627 Petunia axillaris
Peaxi162Scf00304g00230 Petunia axillaris
Peaxi162Scf00412g00054 Petunia axillaris
Peaxi162Scf00417g00611 Petunia axillaris
PGR042G3997 Punica granatum
PGSC0003DMG400000905 Solanum tuberosum
Phvul.008G165700 Phaseolus vulgaris
Potri.001G137401 Populus trichocarpa
Potri.002G086400 Populus trichocarpa
Potri.005G174800 Populus trichocarpa
Pp3c2_21290 Physcomitrium patens
PRCOL_00000581 Prasinoderma coloniale
Prupe.1G501900 Prunus persica
Psat2g078400 Pisum sativum
Psat3g179240 Pisum sativum
PSO210G0971 Papaver somniferum
PSO447G0173 Papaver somniferum
QL09p035311 Quercus lobata
QL09p036540 Quercus lobata
RcHm_v2.0_Chr6g0295321 Rosa chinensis
RhsimUnG0094900 Rhododendron simsii
Sabra02G0067800 Salix brachista
Sabra05G0132000 Salix brachista
SalBow6G6346 Salvia bowleyana
Sc26g0000330 Simmondsia chinensis
Sed0025890 Sechium edule
SEGI_19564 Sequoiadendron giganteum
SEGI_40239 Sequoiadendron giganteum
SGA_v2.0_scaffold25G11108 Striga asiatica
SMO230G0006 Selaginella moellendorffii
Solyc11g013030.2 Solanum lycopersicum
Sopen11g007770 Solanum pennellii
Sp5g32850 Schrenkiella parvula
TAR381G0559 Trochodendron aralioides
TAR625G1072 Trochodendron aralioides
THA.LOC104813649 Tarenaya hassleriana
Thecc.08G121000 Theobroma cacao
Thhalv10018051m.g Eutrema salsugineum
TPR.G8512 Trifolium pratense
TWI12G0723 Tripterygium wilfordii
TWI56G0793 Tripterygium wilfordii
unitig_61.g26064 Utricularia gibba
vmacro00814 Vaccinium macrocarpon
VMungo0647G0069 Vigna mungo
Zm00001eb194140 Zea mays

User provided reference genes

Program Settings