Gene: Zm00001eb194140
General Information
Structural Information
- Species Zea mays
- Gene Identifier Zm00001eb194140
- Transcript Identifier Zm00001eb194140_T002
- Gene Type Coding gene
- Location 4 : 185569519-185575238 : positive
Gene Family Information
- ID HOM05D002169
- #Genes/#Species 309/100
- Phylogenetic origin
- ID ORTHO05D006927
- #Genes/#Species 136/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Zm00001eb194140_T002
- pid Zm00001eb194140_P002
- uniprot A0A1D6MME3
- uniprot K7UA17
- uniprot A0A3L6F1M8
- V4_identifier Zm00001d052218
Descriptions
- Description Zm00001e023860
- Description DIS3-like exonuclease 2
- Description Inactive exonuclease DIS3L2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006402 | IBA | GOA Database | mRNA catabolic process | |
| GO:0034427 | IEA | GOA Database | nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' | |
| GO:0090305 | IEA | GOA Database | nucleic acid phosphodiester bond hydrolysis | |
| GO:0000291 | IEA | GOA Database | nuclear-transcribed mRNA catabolic process, exonucleolytic | |
| GO:1990074 | IEA | GOA Database | polyuridylation-dependent mRNA catabolic process | |
| GO:0090503 | IEA | GOA Database | RNA phosphodiester bond hydrolysis, exonucleolytic | |
| GO:0090501 | IEA | GOA Database | RNA phosphodiester bond hydrolysis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0004540 | IEA | GOA Database | ribonuclease activity | |
| GO:0004540 | IEA | InterPro | ribonuclease activity | |
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0000175 | IBA IEA | GOA Database | 3'-5'-exoribonuclease activity | |
| GO:0004518 | IEA | GOA Database | nuclease activity | |
| GO:0004527 | IEA | GOA Database | exonuclease activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000932 | IBA IEA | GOA Database | P-body | |
| GO:0000178 | IBA | GOA Database | exosome (RNase complex) | |
| GO:0005737 | IEA | GOA Database | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.4.2.7 | RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.exoribonuclease (SOV) |