Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p13300 Brassica napus
Aa31LG5G4730 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3364 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3466 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.454 Anthoceros agrestis
Actinidia31313 Actinidia chinensis
Actinidia32476 Actinidia chinensis
Ah.08g211440 Amaranthus hybridus
Ah.15g091430 Amaranthus hybridus
AL4G28000 Arabidopsis lyrata
Aqoxy2G01650 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0YCB9L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.98D3Z3 Arachis hypogaea
AT2G32600 Arabidopsis thaliana
ATR0118G005 Amborella trichopoda
ATR0118G008 Amborella trichopoda
Atru.chr8.1747 Acer truncatum
AUR62026953 Chenopodium quinoa
AUR62043425 Chenopodium quinoa
AUR62043819 Chenopodium quinoa
BcaB02g10459 Brassica carinata
BolC4t23259H Brassica oleracea
BraA05t20271Z Brassica rapa
C04p17070 Brassica napus
CAN.G1038.16 Capsicum annuum
CANSAT80G2663 Cannabis sativa
CARHR126450 Cardamine hirsuta
Carub.0004s1393 Capsella rubella
Carub.0007s3257 Capsella rubella
Ca_23152_v3 Cicer arietinum L.
CBR_g54837 Chara braunii
Cc00_g23430 Coffea canephora
Cc00_g35330 Coffea canephora
Cc06_g04560 Coffea canephora
CDE03G0163 Ceratophyllum demersum
CDE06G0795 Ceratophyllum demersum
Cfa021476 Carpinus fangiana
Ciclev10012150m.g Citrus clementina
CiPaw.10G001700 Carya illinoinensis
ClCG10G019870 Citrullus lanatus
COL.COLO4_26909 Corchorus olitorius
Cpa.g.sc87.109 Carica papaya
Cre06.g252700 Chlamydomonas reinhardtii
CsaV3_3G036230 Cucumis sativus L.
CSS0004382 Camellia sinensis var. sinensis
CSS0024828 Camellia sinensis var. sinensis
DCAR_020804 Daucus carota
Dinv35815 Davidia involucrata
Dinv37340 Davidia involucrata
Duzib128G1555 Durio zibethinus
ECA238G3499 Erigeron canadensis
EL10Ac7g16690 Beta vulgaris
Eucgr.K02436 Eucalyptus grandis
FAN02G2373 Fragaria x ananassa
FAN05G0091 Fragaria x ananassa
FAN05G3347 Fragaria x ananassa
FAN09G4523 Fragaria x ananassa
FAN14G4883 Fragaria x ananassa
FvH4_6g16880 Fragaria vesca
Glyma.13G367400 Glycine max
Glyma.15G005900 Glycine max
Gohir.A09G144600 Gossypium hirsutum
Gohir.D09G140400 Gossypium hirsutum
Gorai.006G161000 Gossypium raimondii
GSVIVG01033687001 Vitis vinifera
HanXRQChr13g0402661 Helianthus annuus
Haze_05755 Corylus avellana
Haze_19437 Corylus avellana
Haze_26764 Corylus avellana
Hma1.2p1_0225F.1_g095000 Hydrangea macrophylla
HPP92_017214 Vanilla planifolia
Hund19382 Selenicereus undatus
Lalb_Chr04g0254861 Lupinus albus
Lalb_Chr10g0099851 Lupinus albus
Lj3C990G15 Lonicera japonica
Lj3g0015942 Lotus japonicus
Lsat_1_v5_gn_1_52460 Lactuca sativa
Manes.09G064318 Manihot esculenta
Mapoly0069s0004 Marchantia polymorpha
MBI17_g39319_MAGBIO Magnolia biondii
MBI17_g39322_MAGBIO Magnolia biondii
MCO12G316 Micromonas commoda
MD04G1088800 Malus domestica
MD12G1106500 Malus domestica
Medtr8g009970 Medicago truncatula
MELO3C009381.2 Cucumis melo
Migut.J00456 Erythranthe guttata
MSTRG.19190 Avicennia marina
Nitab4.5_0000349g0010 Nicotiana tabacum
Nitab4.5_0000349g0040 Nicotiana tabacum
Nitab4.5_0002373g0090 Nicotiana tabacum
Nitab4.5_0003314g0100 Nicotiana tabacum
Nn6g35217 Nelumbo nucifera
Oeu042111.1 Olea europaea
Os03g0263500 Oryza sativa ssp. japonica
Peaxi162Scf00407g00631 Petunia axillaris
PGR119G0162 Punica granatum
PGSC0003DMG400003874 Solanum tuberosum
Phvul.005G180000 Phaseolus vulgaris
Potri.006G121300 Populus trichocarpa
Potri.016G097600 Populus trichocarpa
Pp3c15_8160 Physcomitrium patens
Pp3c4_2800 Physcomitrium patens
Pp3c9_13030 Physcomitrium patens
PRCOL_00004335 Prasinoderma coloniale
Prupe.4G071900 Prunus persica
Prupe.7G125300 Prunus persica
Psat0s2549g0120 Pisum sativum
Psat1g060440 Pisum sativum
Psat1g060480 Pisum sativum
Psat1g060520 Pisum sativum
Psat1g060600 Pisum sativum
PSO541G4270 Papaver somniferum
PSO675G8307 Papaver somniferum
QL03p020097 Quercus lobata
RcHm_v2.0_Chr3g0470901 Rosa chinensis
RcHm_v2.0_Chr7g0191101 Rosa chinensis
RhsimUnG0004400 Rhododendron simsii
RhsimUnG0067800 Rhododendron simsii
Sabra06G0095500 Salix brachista
Sc20g0005690 Simmondsia chinensis
Sed0022535 Sechium edule
SEGI_10194 Sequoiadendron giganteum
SGA_v2.0_scaffold40G15470 Striga asiatica
SHI12393 Sapria himalayana
SMO031G0002 Selaginella moellendorffii
SMO228G0117 Selaginella moellendorffii
Solyc09g008470.4 Solanum lycopersicum
Sopen09g003300 Solanum pennellii
Sp4g14930 Schrenkiella parvula
TAR369G0565 Trochodendron aralioides
TAR633G1835 Trochodendron aralioides
TAR636G1083 Trochodendron aralioides
THA.LOC104816037 Tarenaya hassleriana
Thecc.05G071600 Theobroma cacao
Thecc.05G071900 Theobroma cacao
Thhalv10017051m.g Eutrema salsugineum
TPR.G17360 Trifolium pratense
TWI74G0641 Tripterygium wilfordii
unitig_26.g9238 Utricularia gibba
vmacro08797 Vaccinium macrocarpon
VMungo0219G0001 Vigna mungo
VMungo0917G0001 Vigna mungo
Zm00001eb011590 Zea mays
Zm00001eb398100 Zea mays

User provided reference genes

Program Settings