Gene: Pp3c4_2800
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c4_2800
- Transcript Identifier Pp3c4_2800V3.1
- Gene Type Coding gene
- Location Chr04 : 1738550-1739146 : negative
Gene Family Information
- ID HOM05D004689
- #Genes/#Species 156/99
- Phylogenetic origin
- ID ORTHO05D006269
- #Genes/#Species 145/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c4_2800V3.1
- pacid 32920031
- uniprot A0A2K1KLZ4
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000245 | IBA | GOA Database | spliceosomal complex assembly |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | ISO | PLAZA Homology (enrichment) | nucleic acid binding | HOM05D004689 |
| GO:0008270 | ISO | PLAZA Homology (enrichment) | zinc ion binding | HOM05D004689 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005686 | IBA | GOA Database | U2 snRNP | |
| GO:0071004 | IBA | GOA Database | U2-type prespliceosome | |
| GO:0071013 | IBA | GOA Database | catalytic step 2 spliceosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR031781 | SF3A2 domain |
| Mapman id | Description |
|---|---|
| 16.2.1.2.3.2 | RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.component SF3A2 |