Gene: Pp3c15_8160

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c15_8160
  • Transcript Identifier Pp3c15_8160V3.2
  • Gene Type Coding gene
  • Location Chr15 : 5184047-5186732 : negative

Gene Family Information

  • ID HOM05D004689
  • #Genes/#Species 156/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c15_8160V3.2
  • pacid 32927709
  • alias Phypa_97102
  • alias Phpat.015G035900
  • alias Pp1s318_71V6
  • uniprot A0A2K1JCI0

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0008380
IEA
GOA DatabaseRNA splicing
GO:0000245
IBA
GOA Databasespliceosomal complex assembly

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005681
IEA
GOA Databasespliceosomal complex
GO:0005634
IEA
GOA Databasenucleus
GO:0071013
IBA
GOA Databasecatalytic step 2 spliceosome
GO:0071004
IBA
GOA DatabaseU2-type prespliceosome
GO:0005686
IBA
GOA DatabaseU2 snRNP

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR031781 SF3A2 domain
IPR036236 Zinc finger C2H2 superfamily
IPR003604 Matrin/U1-C-like, C2H2-type zinc finger
Mapman id Description
16.2.1.2.3.2 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.component SF3A2