Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG8G3450 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2493 Anthoceros agrestis
Actinidia32706 Actinidia chinensis
Actinidia39142 Actinidia chinensis
Ah.01g005680 Amaranthus hybridus
AL3G29060 Arabidopsis lyrata
Aqoxy7G01469 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4Y1F7A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.64XDM2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NE95XN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WG6QSW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XV48AZ Arachis hypogaea
AT3G16310 Arabidopsis thaliana
ATR0019G039 Amborella trichopoda
ATR0705G205 Amborella trichopoda
Atru.chr1.3498 Acer truncatum
AUR62022182 Chenopodium quinoa
AUR62031885 Chenopodium quinoa
BcaB06g25724 Brassica carinata
BcaC05g28894 Brassica carinata
BolC5t33769H Brassica oleracea
BraA05t22146Z Brassica rapa
C05p50190 Brassica napus
CAN.G438.5 Capsicum annuum
CANSAT01G3179 Cannabis sativa
CARHR091520 Cardamine hirsuta
Carub.0003s1606 Capsella rubella
Ca_01157_v3 Cicer arietinum L.
CBR_g44943 Chara braunii
Cc04_g02700 Coffea canephora
CDE05G1429 Ceratophyllum demersum
CDE05G3078 Ceratophyllum demersum
Ciclev10026016m.g Citrus clementina
CiPaw.01G232800 Carya illinoinensis
CiPaw.02G146900 Carya illinoinensis
ClCG09G000060 Citrullus lanatus
COL.COLO4_30486 Corchorus olitorius
Cpa.g.c40702 Carica papaya
Cpa.g.c43067 Carica papaya
Cre12.g553050 Chlamydomonas reinhardtii
Cre14.g609650 Chlamydomonas reinhardtii
CsaV3_7G035410 Cucumis sativus L.
CSS0014120 Camellia sinensis var. sinensis
CSS0036359 Camellia sinensis var. sinensis
DCAR_016196 Daucus carota
Dinv30451 Davidia involucrata
Dinv37993 Davidia involucrata
Duzib192G0168 Durio zibethinus
Duzib235G0210 Durio zibethinus
ECA232G1650 Erigeron canadensis
EL10Ac9g22101 Beta vulgaris
Eucgr.J02948 Eucalyptus grandis
FAN02G1875 Fragaria x ananassa
FAN05G1125 Fragaria x ananassa
FAN09G1375 Fragaria x ananassa
FAN14G1716 Fragaria x ananassa
FvH4_6g32170 Fragaria vesca
Glyma.13G355300 Glycine max
Glyma.15G018900 Glycine max
Gohir.A02G118600 Gossypium hirsutum
Gohir.A10G066900 Gossypium hirsutum
Gohir.D03G059150 Gossypium hirsutum
Gohir.D03G059200 Gossypium hirsutum
Gohir.D10G068000 Gossypium hirsutum
Gorai.003G063100 Gossypium raimondii
Gorai.011G072600 Gossypium raimondii
GSVIVG01017013001 Vitis vinifera
HanXRQChr09g0275881 Helianthus annuus
HanXRQChr16g0501211 Helianthus annuus
Haze_15829 Corylus avellana
HPP92_002859 Vanilla planifolia
HPP92_002877 Vanilla planifolia
Hund00671 Selenicereus undatus
Hund06654 Selenicereus undatus
Lalb_Chr14g0373091 Lupinus albus
Lalb_Chr24g0396111 Lupinus albus
Lj3g0003786 Lotus japonicus
Lj9A511G47 Lonicera japonica
Lj9A524G48 Lonicera japonica
Lsat_1_v5_gn_4_99980 Lactuca sativa
Manes.04G132600 Manihot esculenta
Manes.11G035000 Manihot esculenta
Mapoly0014s0033 Marchantia polymorpha
MBI01_g42890_MAGBIO Magnolia biondii
MCO07G475 Micromonas commoda
MD07G1258000 Malus domestica
MD09G1205800 Malus domestica
MD16G1217600 Malus domestica
MD17G1186700 Malus domestica
Medtr2g101270 Medicago truncatula
MELO3C024450.2 Cucumis melo
Migut.I00909 Erythranthe guttata
MSTRG.11036 Avicennia marina
MSTRG.22647 Avicennia marina
Nitab4.5_0001755g0090 Nicotiana tabacum
Nitab4.5_0003167g0040 Nicotiana tabacum
Nn2g11613 Nelumbo nucifera
Nn5g29960 Nelumbo nucifera
Nn8g39120 Nelumbo nucifera
Oeu001891.1 Olea europaea
Os01g0200500 Oryza sativa ssp. japonica
Os05g0520100 Oryza sativa ssp. japonica
Peaxi162Scf00038g00844 Petunia axillaris
Peaxi162Scf00894g00009 Petunia axillaris
Peaxi162Scf11517g00001 Petunia axillaris
PGR102G2474 Punica granatum
PGSC0003DMG400002534 Solanum tuberosum
Phvul.005G167000 Phaseolus vulgaris
Potri.001G188300 Populus trichocarpa
Pp3c1_40780 Physcomitrium patens
Pp3c5_15240 Physcomitrium patens
Pp3c6_16260 Physcomitrium patens
PRCOL_00002288 Prasinoderma coloniale
Prupe.3G061200 Prunus persica
Psat5g297080 Pisum sativum
PSO173G0077 Papaver somniferum
PSO675G8939 Papaver somniferum
PSO832G2273 Papaver somniferum
QL05p020530 Quercus lobata
RcHm_v2.0_Chr2g0140061 Rosa chinensis
Rhsim08G0226300 Rhododendron simsii
Sabra01G0152700 Salix brachista
SalBow1G2757 Salvia bowleyana
SalBow2G1418 Salvia bowleyana
Sc10g0007170 Simmondsia chinensis
Sc10g0007240 Simmondsia chinensis
Sed0013882 Sechium edule
Sed0014944 Sechium edule
SEGI_39894 Sequoiadendron giganteum
SGA_v2.0_scaffold69G23330 Striga asiatica
SMO144G0168 Selaginella moellendorffii
Solyc03g120880.4 Solanum lycopersicum
Sopen03g039700 Solanum pennellii
Sp3g14680 Schrenkiella parvula
TAR624G0319 Trochodendron aralioides
TAR624G1091 Trochodendron aralioides
TAR624G1397 Trochodendron aralioides
TAR636G0039 Trochodendron aralioides
THA.LOC104817965 Tarenaya hassleriana
Thecc.06G097500 Theobroma cacao
Thhalv10021095m.g Eutrema salsugineum
TPR.G37257 Trifolium pratense
TWI18G0989 Tripterygium wilfordii
unitig_37.g12259 Utricularia gibba
unitig_46.g18560 Utricularia gibba
vmacro18867 Vaccinium macrocarpon
VMungo1080G0916 Vigna mungo
Zm00001eb293750 Zea mays
Zm00001eb337990 Zea mays
Zm00001eb353450 Zea mays

User provided reference genes

Program Settings