Gene: Os01g0200500

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os01g0200500
  • Transcript Identifier Os01t0200500-01
  • Gene Type Coding gene
  • Location chr01 : 5442941-5445852 : positive

Gene Family Information

  • ID HOM05D004877
  • #Genes/#Species 152/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os01t0200500-01
  • MSU-ID LOC_Os01g10350.1
  • uniprot Q5QN03

Descriptions

  • Description MPPN family protein.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006913
IEA
GOA Databasenucleocytoplasmic transport
GO:0006913
IEA
InterPronucleocytoplasmic transport
GO:0006999
IBA
GOA Databasenuclear pore organization
GO:0006607
IBA
GOA DatabaseNLS-bearing protein import into nucleus
GO:0006355
IBA
GOA Databaseregulation of transcription, DNA-templated
GO:0051028
IEA
GOA DatabasemRNA transport
GO:0015031
IEA
GOA Databaseprotein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003697
IBA
GOA Databasesingle-stranded DNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0017056
IBA
IEA
GOA Databasestructural constituent of nuclear pore
GO:0017056
IEA
InterProstructural constituent of nuclear pore
GO:0005543
IBA
GOA Databasephospholipid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031965
IEA
GOA Databasenuclear membrane
GO:0031965
IEA
InterPronuclear membrane
GO:0044613
IBA
GOA Databasenuclear pore central transport channel
GO:0044615
IBA
GOA Databasenuclear pore nuclear basket
GO:0005634
IEA
GOA Databasenucleus
GO:0005643
IEA
GOA Databasenuclear pore

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007846 RNA-recognition motif (RRM) Nup35-type domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR017389 Nucleoporin, NUP53
IPR035979 RNA-binding domain superfamily
Mapman id Description
23.5.1.1.6.5 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.nucleoporin (NUP35)