Gene: SGA_v2.0_scaffold69G23330
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold69G23330
- Transcript Identifier SGA_v2.0_scaffold69T23330
- Gene Type Coding gene
- Location scaffold69 : 1654637-1658875 : positive
Gene Family Information
- ID HOM05D004877
- #Genes/#Species 152/97
- Phylogenetic origin
- ID ORTHO05D005942
- #Genes/#Species 150/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
Descriptions
- product Nucleoporin NUP53
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006913 | IEA | InterPro | nucleocytoplasmic transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0017056 | IEA | InterPro | structural constituent of nuclear pore | |
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031965 | IEA | InterPro | nuclear membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR017389 | Nucleoporin, NUP53 |
| IPR035979 | RNA-binding domain superfamily |
| IPR006459 | Casparian strip membrane protein |
| IPR007846 | RNA-recognition motif (RRM) Nup35-type domain |
| IPR006702 | Casparian strip membrane protein domain |
| Mapman id | Description |
|---|---|
| 23.5.1.1.6.5 | Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.nucleoporin (NUP35) |