Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p03780 Brassica napus
A09p49970 Brassica napus
Aa31LG10G11970 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1488 Anthoceros agrestis
AL5G38530 Arabidopsis lyrata
Aqoxy2G00352 Aquilegia oxysepala
AT3G57050 Arabidopsis thaliana
ATR1134G130 Amborella trichopoda
Atru.chr1.1491 Acer truncatum
AUR62030340 Chenopodium quinoa
AUR62040828 Chenopodium quinoa
BcaB02g07623 Brassica carinata
BcaB02g08332 Brassica carinata
BcaC02g09899 Brassica carinata
BcaC07g40051 Brassica carinata
BcaC07g40082 Brassica carinata
BolC4t25094H Brassica oleracea
BolC8t50852H Brassica oleracea
BraA04t16056Z Brassica rapa
BraA09t40447Z Brassica rapa
C04p35400 Brassica napus
C08p32380 Brassica napus
CAN.G641.73 Capsicum annuum
CANSAT64G2870 Cannabis sativa
CARHR167240 Cardamine hirsuta
Carub.0005s2385 Capsella rubella
Ca_28177_v3 Cicer arietinum L.
Ca_28217_v3 Cicer arietinum L.
CBR_g168 Chara braunii
CBR_g169 Chara braunii
CBR_g175 Chara braunii
CBR_g178 Chara braunii
CBR_g179 Chara braunii
CBR_g34755 Chara braunii
CBR_g45651 Chara braunii
CBR_g53946 Chara braunii
CBR_g57727 Chara braunii
Cc06_g18900 Coffea canephora
CDE06G0603 Ceratophyllum demersum
Cfa020023 Carpinus fangiana
Cfa024823 Carpinus fangiana
Ciclev10020055m.g Citrus clementina
CiPaw.09G046100 Carya illinoinensis
ClCG08G009380 Citrullus lanatus
COL.COLO4_05063 Corchorus olitorius
COL.COLO4_05064 Corchorus olitorius
COL.COLO4_05065 Corchorus olitorius
Cpa.g.sc5.210 Carica papaya
Cre16.g669550 Chlamydomonas reinhardtii
CsaV3_6G031510 Cucumis sativus L.
CSS0010163 Camellia sinensis var. sinensis
DCAR_013636 Daucus carota
DCAR_020551 Daucus carota
Dinv05063 Davidia involucrata
Dinv34377 Davidia involucrata
Duzib093G2101 Durio zibethinus
ECA236G4630 Erigeron canadensis
ECA248G3688 Erigeron canadensis
EL10Ac3g07205 Beta vulgaris
Eucgr.A02261 Eucalyptus grandis
FAN11G0160 Fragaria x ananassa
FAN16G3033 Fragaria x ananassa
FAN21G0837 Fragaria x ananassa
FvH4_3g30150 Fragaria vesca
Glyma.03G129700 Glycine max
Glyma.19G132000 Glycine max
Gohir.A11G308100 Gossypium hirsutum
Gohir.D11G323500 Gossypium hirsutum
Gorai.007G353500 Gossypium raimondii
GSVIVG01033607001 Vitis vinifera
HanXRQChr01g0009291 Helianthus annuus
HanXRQChr01g0009311 Helianthus annuus
HanXRQChr06g0176921 Helianthus annuus
Haze_20194 Corylus avellana
Haze_26308 Corylus avellana
Haze_26566 Corylus avellana
HPP92_013743 Vanilla planifolia
Hund24627 Selenicereus undatus
Lalb_Chr20g0110151 Lupinus albus
Lalb_Chr25g0286861 Lupinus albus
Lj1A1103T61 Lonicera japonica
Lj2g0003873 Lotus japonicus
Lsat_1_v5_gn_8_82641 Lactuca sativa
Manes.01G122300 Manihot esculenta
Manes.09G007000 Manihot esculenta
Mapoly0005s0149 Marchantia polymorpha
MBI16_g23860_MAGBIO Magnolia biondii
MCO10G385 Micromonas commoda
MD00G1088500 Malus domestica
MD12G1093700 Malus domestica
Medtr1g064320 Medicago truncatula
MELO3C026534.2 Cucumis melo
Migut.J01673 Erythranthe guttata
Migut.K00129 Erythranthe guttata
MSTRG.7398 Avicennia marina
Nitab4.5_0000571g0120 Nicotiana tabacum
Nitab4.5_0001364g0030 Nicotiana tabacum
Nitab4.5_0002162g0100 Nicotiana tabacum
Nitab4.5_0002208g0110 Nicotiana tabacum
Nn2g14860 Nelumbo nucifera
Nn7g36657 Nelumbo nucifera
Oeu063773.2 Olea europaea
Os06g0175800 Oryza sativa ssp. japonica
Os06g0176900 Oryza sativa ssp. japonica
Peaxi162Scf00420g00564 Petunia axillaris
Peaxi162Scf00970g00166 Petunia axillaris
Peaxi162Scf01378g00122 Petunia axillaris
PGR031G0959 Punica granatum
PGR031G1759 Punica granatum
PGR044G2076 Punica granatum
PGSC0003DMG400029836 Solanum tuberosum
PGSC0003DMG400035945 Solanum tuberosum
Phvul.001G125400 Phaseolus vulgaris
Potri.016G038200 Populus trichocarpa
Pp3c5_1990 Physcomitrium patens
Pp3s476_12 Physcomitrium patens
Pp3s476_16 Physcomitrium patens
PRCOL_00006688 Prasinoderma coloniale
Prupe.7G042400 Prunus persica
Psat6g070960 Pisum sativum
PSO017G5717 Papaver somniferum
PSO063G3870 Papaver somniferum
PSO063G4026 Papaver somniferum
PSO063G6072 Papaver somniferum
PSO170G6374 Papaver somniferum
PSO832G4537 Papaver somniferum
QL07p008834 Quercus lobata
QL07p008853 Quercus lobata
RcHm_v2.0_Chr2g0125281 Rosa chinensis
Rhsim03G0041800 Rhododendron simsii
Rhsim03G0042000 Rhododendron simsii
RhsimUnG0220800 Rhododendron simsii
RhsimUnG0239200 Rhododendron simsii
Sabra16G0040100 Salix brachista
Sabra16G0044800 Salix brachista
SalBow2G1785 Salvia bowleyana
Sc13g0001250 Simmondsia chinensis
Sed0022611 Sechium edule
SEGI_02944 Sequoiadendron giganteum
SGA_v2.0_scaffold94G28527 Striga asiatica
SMO358G0226 Selaginella moellendorffii
Solyc10g079720.2 Solanum lycopersicum
Sopen10g030350 Solanum pennellii
Sp5g05530 Schrenkiella parvula
TAR623G1659 Trochodendron aralioides
THA.LOC104824410 Tarenaya hassleriana
Thecc.05G138900 Theobroma cacao
Thhalv10005955m.g Eutrema salsugineum
TWI53G0748 Tripterygium wilfordii
TWI77G0683 Tripterygium wilfordii
vmacro07810 Vaccinium macrocarpon
VMungo1383G2598 Vigna mungo
Zm00001eb375190 Zea mays

User provided reference genes

Program Settings