Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p31150 Brassica napus
Aa31LG3G1370 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3336 Anthoceros agrestis
Actinidia13639 Actinidia chinensis
Actinidia31635 Actinidia chinensis
Ah.12g064450 Amaranthus hybridus
AL4G34440 Arabidopsis lyrata
AL4G38660 Arabidopsis lyrata
Aqoxy4G03277 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.561PLB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LX8ZS6 Arachis hypogaea
AT2G40770 Arabidopsis thaliana
ATR1127G041 Amborella trichopoda
Atru.chr12.195 Acer truncatum
AUR62024946 Chenopodium quinoa
AUR62030592 Chenopodium quinoa
BcaC02g12882 Brassica carinata
BcaC02g12883 Brassica carinata
BolC4t28354H Brassica oleracea
BraA04t18570Z Brassica rapa
C04p68550 Brassica napus
CAN.G1229.10 Capsicum annuum
CANSAT56G0526 Cannabis sativa
CARHR135870 Cardamine hirsuta
Carub.0004s2307 Capsella rubella
Ca_05521_v3 Cicer arietinum L.
Cc02_g05220 Coffea canephora
CDE04G1441 Ceratophyllum demersum
CDE04G2226 Ceratophyllum demersum
CDE04G3054 Ceratophyllum demersum
CDE04G3532 Ceratophyllum demersum
Cfa001196 Carpinus fangiana
Cfa026715 Carpinus fangiana
Ciclev10030489m.g Citrus clementina
CiPaw.01G307300 Carya illinoinensis
ClCG11G005620 Citrullus lanatus
COL.COLO4_19474 Corchorus olitorius
Cpa.g.sc19.41 Carica papaya
Cre13.g603400 Chlamydomonas reinhardtii
CsaV3_6G002390 Cucumis sativus L.
CSS0031284 Camellia sinensis var. sinensis
DCAR_014660 Daucus carota
Dinv21856 Davidia involucrata
Dinv21857 Davidia involucrata
Duzib106G0698 Durio zibethinus
ECA238G2994 Erigeron canadensis
EL10Ac2g02668 Beta vulgaris
Eucgr.J00103 Eucalyptus grandis
FAN03G3286 Fragaria x ananassa
FAN06G3663 Fragaria x ananassa
FAN10G2846 Fragaria x ananassa
FAN18G3827 Fragaria x ananassa
FvH4_7g26110 Fragaria vesca
Glyma.02G219200 Glycine max
Glyma.14G186500 Glycine max
Gohir.A10G177700 Gossypium hirsutum
Gohir.D10G184300 Gossypium hirsutum
Gorai.011G206500 Gossypium raimondii
GSVIVG01032657001 Vitis vinifera
HanXRQChr14g0460551 Helianthus annuus
Haze_17369 Corylus avellana
Hma1.2p1_0264F.1_g105950 Hydrangea macrophylla
Hma1.2p1_0264F.1_g105960 Hydrangea macrophylla
Hma1.2p1_1805F.1_g303150 Hydrangea macrophylla
Hma1.2p1_1805F.1_g303160 Hydrangea macrophylla
Hma1.2p1_1805F.1_g303170 Hydrangea macrophylla
Hma1.2p1_1805F.1_g303180 Hydrangea macrophylla
HPP92_012544 Vanilla planifolia
Hund13438 Selenicereus undatus
Lalb_Chr17g0344711 Lupinus albus
Lj8C53G7 Lonicera japonica
LjContig00408g0012805 Lotus japonicus
LjContig00408g0017043 Lotus japonicus
LjContig00408g0021693 Lotus japonicus
LjContig00408g0027695 Lotus japonicus
Lsat_1_v5_gn_2_126780 Lactuca sativa
Lsat_1_v5_gn_9_23140 Lactuca sativa
Manes.10G003100 Manihot esculenta
Mapoly0021s0042 Marchantia polymorpha
MBI15_g39394_MAGBIO Magnolia biondii
MCO04G492 Micromonas commoda
MD01G1169300 Malus domestica
MD07G1235200 Malus domestica
MD07G1235300 Malus domestica
Medtr4g070440 Medicago truncatula
Medtr5g067980 Medicago truncatula
MELO3C020016.2 Cucumis melo
Migut.F00567 Erythranthe guttata
Nitab4.5_0000008g0610 Nicotiana tabacum
Nitab4.5_0000171g0230 Nicotiana tabacum
Nitab4.5_0000171g0280 Nicotiana tabacum
Nitab4.5_0006356g0010 Nicotiana tabacum
Nitab4.5_0006356g0020 Nicotiana tabacum
Nn2g10269 Nelumbo nucifera
Nn3g18291 Nelumbo nucifera
Oeu064000.1 Olea europaea
Oeu064001.1 Olea europaea
Os07g0680500 Oryza sativa ssp. japonica
Peaxi162Scf00073g02324 Petunia axillaris
Peaxi162Scf00073g02333 Petunia axillaris
PGR044G2398 Punica granatum
Phvul.008G186300 Phaseolus vulgaris
Potri.019G060000 Populus trichocarpa
Potri.019G060126 Populus trichocarpa
Potri.019G060210 Populus trichocarpa
Potri.019G060300 Populus trichocarpa
Potri.019G060900 Populus trichocarpa
Pp3c18_13500 Physcomitrium patens
PRCOL_00006526 Prasinoderma coloniale
Prupe.2G265500 Prunus persica
Psat2g061800 Pisum sativum
PSO017G2233 Papaver somniferum
PSO063G4276 Papaver somniferum
PSO170G4230 Papaver somniferum
QL08p003473 Quercus lobata
QL08p037214 Quercus lobata
QL08p065069 Quercus lobata
QL08p065080 Quercus lobata
RcHm_v2.0_Chr1g0372551 Rosa chinensis
Rhsim03G0153500 Rhododendron simsii
Sabra19G0074700 Salix brachista
SalBow3G2275 Salvia bowleyana
Sc11g0006050 Simmondsia chinensis
Sed0014960 Sechium edule
SEGI_02885 Sequoiadendron giganteum
SEGI_10529 Sequoiadendron giganteum
SEGI_26880 Sequoiadendron giganteum
SEGI_41016 Sequoiadendron giganteum
SEGI_41607 Sequoiadendron giganteum
SGA_v2.0_scaffold18G08517 Striga asiatica
SGA_v2.0_scaffold44G16628 Striga asiatica
SMO199G0099 Selaginella moellendorffii
SMO361G0619 Selaginella moellendorffii
SMO361G0667 Selaginella moellendorffii
SMO361G0687 Selaginella moellendorffii
SMO361G0759 Selaginella moellendorffii
Solyc03g095680.2 Solanum lycopersicum
Solyc03g095690.3 Solanum lycopersicum
Solyc07g064540.3 Solanum lycopersicum
Solyc09g042480.2 Solanum lycopersicum
Solyc12g043070.2 Solanum lycopersicum
Sopen03g025600 Solanum pennellii
Sopen03g025610 Solanum pennellii
Sopen10g016820 Solanum pennellii
Sp4g23090 Schrenkiella parvula
TAR623G0849 Trochodendron aralioides
THA.LOC104824249 Tarenaya hassleriana
Thecc.10G184900 Theobroma cacao
Thhalv10016132m.g Eutrema salsugineum
TPR.G33913 Trifolium pratense
TWI09G0099 Tripterygium wilfordii
unitig_0.g1674 Utricularia gibba
vmacro06901 Vaccinium macrocarpon
VMungo0647G0473 Vigna mungo
VMungo0647G0811 Vigna mungo
VMungo0647G1932 Vigna mungo
Zm00001eb330720 Zea mays

User provided reference genes

Program Settings