Gene: Potri.019G060900
General Information
Structural Information
- Species Populus trichocarpa
- Gene Identifier Potri.019G060900
- Transcript Identifier Potri.019G060900.1
- Gene Type Coding gene
- Location Chr19 : 10090338-10104459 : negative
Gene Family Information
- ID HOM05D004933
- #Genes/#Species 150/96
- Phylogenetic origin
- ID ORTHO05D005465
- #Genes/#Species 157/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id Potri.019G060900.v4.1
- pacid 42774592
- synonym POPTR_0019s08910
Descriptions
- Description K15710 - E3 ubiquitin-protein ligase SHPRH [EC:3.6.4.- 6.3.2.19] (SHPRH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0070615 | IEA | InterPro | nucleosome-dependent ATPase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR018957 | Zinc finger, C3HC4 RING-type |
| IPR001650 | Helicase, C-terminal |
| IPR000330 | SNF2, N-terminal |
| IPR001841 | Zinc finger, RING-type |
| IPR038718 | SNF2-like, N-terminal domain superfamily |
| IPR001965 | Zinc finger, PHD-type |
| IPR011011 | Zinc finger, FYVE/PHD-type |
| Mapman id | Description |
|---|---|
| 12.4.8.2.1 | Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.SSO1653-like group.chromatin remodeling factor (SHPRH) |