Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p27780 Brassica napus
Aa31LG3G5910 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3483 Anthoceros agrestis
Actinidia16192 Actinidia chinensis
Actinidia19386 Actinidia chinensis
Actinidia19390 Actinidia chinensis
Ah.08g218120 Amaranthus hybridus
AL664U10020 Arabidopsis lyrata
AL8G24380 Arabidopsis lyrata
Aqoxy3G01433 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.598RU2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y3SZAS Arachis hypogaea
AT5G50320 Arabidopsis thaliana
ATR0824G280 Amborella trichopoda
Atru.chr9.1011 Acer truncatum
AUR62001277 Chenopodium quinoa
AUR62025729 Chenopodium quinoa
BcaB01g02900 Brassica carinata
BcaC01g04814 Brassica carinata
BolC3t15672H Brassica oleracea
BraA03t11989Z Brassica rapa
C03p33510 Brassica napus
CAN.G1231.25 Capsicum annuum
CAN.G1231.26 Capsicum annuum
CAN.G352.60 Capsicum annuum
CANSAT80G2894 Cannabis sativa
CARHR258210 Cardamine hirsuta
Carub.0008s1036 Capsella rubella
Ca_16090_v3 Cicer arietinum L.
CBR_g17964 Chara braunii
CBR_g17965 Chara braunii
Cc04_g10350 Coffea canephora
CDE02G3278 Ceratophyllum demersum
Cfa018893 Carpinus fangiana
Ciclev10019518m.g Citrus clementina
CiPaw.12G035600 Carya illinoinensis
ClCG06G017620 Citrullus lanatus
COL.COLO4_09266 Corchorus olitorius
Cpa.g.sc4.68 Carica papaya
Cre07.g354100 Chlamydomonas reinhardtii
CsaV3_1G000820 Cucumis sativus L.
CSS0024351 Camellia sinensis var. sinensis
DCAR_025596 Daucus carota
Dinv38470 Davidia involucrata
Dinv38471 Davidia involucrata
Duzib084G0269 Durio zibethinus
ECA247G0271 Erigeron canadensis
EL10Ac7g18073 Beta vulgaris
Eucgr.B00149 Eucalyptus grandis
Eucgr.L01338 Eucalyptus grandis
FAN04G2334 Fragaria x ananassa
FAN08G3357 Fragaria x ananassa
FAN13G2268 Fragaria x ananassa
FAN18G2865 Fragaria x ananassa
FvH4_5g07340 Fragaria vesca
FvH4_5g07410 Fragaria vesca
FvH4_5g07450 Fragaria vesca
Glyma.04G192900 Glycine max
Glyma.06G173000 Glycine max
Gohir.A07G053600 Gossypium hirsutum
Gohir.A11G035300 Gossypium hirsutum
Gohir.D07G057966 Gossypium hirsutum
Gohir.D07G058032 Gossypium hirsutum
Gohir.D11G038900 Gossypium hirsutum
Gorai.001G061500 Gossypium raimondii
Gorai.003G153300 Gossypium raimondii
Gorai.007G041800 Gossypium raimondii
GSVIVG01007544001 Vitis vinifera
HanXRQChr02g0035141 Helianthus annuus
Haze_07277 Corylus avellana
Hma1.2p1_0046F.1_g027540 Hydrangea macrophylla
Hma1.2p1_0046F.1_g027550 Hydrangea macrophylla
HPP92_004592 Vanilla planifolia
Hund05645 Selenicereus undatus
Lalb_Chr08g0236941 Lupinus albus
Lj1g0008389 Lotus japonicus
Lj5C100T5 Lonicera japonica
Lsat_1_v5_gn_1_8721 Lactuca sativa
Manes.06G115200 Manihot esculenta
Manes.14G055300 Manihot esculenta
Mapoly0095s0008 Marchantia polymorpha
MBI11_g17238_MAGBIO Magnolia biondii
MBI11_g36312_MAGBIO Magnolia biondii
MCO06G075 Micromonas commoda
MD00G1134500 Malus domestica
MD06G1152200 Malus domestica
MD06G1153400 Malus domestica
MD06G1154300 Malus domestica
MD06G1154500 Malus domestica
MD06G1155000 Malus domestica
MD06G1155100 Malus domestica
MD06G1155200 Malus domestica
MD06G1155400 Malus domestica
MD06G1155500 Malus domestica
MD06G1155900 Malus domestica
MD06G1156700 Malus domestica
MD06G1156800 Malus domestica
MD14G1163700 Malus domestica
Medtr1g107255 Medicago truncatula
MELO3C026234.2 Cucumis melo
Migut.I00277 Erythranthe guttata
Migut.I00474 Erythranthe guttata
MSTRG.22929 Avicennia marina
Nitab4.5_0001311g0030 Nicotiana tabacum
Nitab4.5_0011188g0020 Nicotiana tabacum
Nn3g16580 Nelumbo nucifera
Nn4g22462 Nelumbo nucifera
Oeu037582.1 Olea europaea
Oeu044608.1 Olea europaea
Os04g0484900 Oryza sativa ssp. japonica
Peaxi162Scf00089g00242 Petunia axillaris
PGR083G1171 Punica granatum
PGSC0003DMG401015202 Solanum tuberosum
Phvul.009G168900 Phaseolus vulgaris
Potri.012G092800 Populus trichocarpa
Potri.015G090500 Populus trichocarpa
Pp3c18_6090 Physcomitrium patens
Pp3c21_15940 Physcomitrium patens
Prupe.5G157100 Prunus persica
Psat6g217640 Pisum sativum
PSO063G5665 Papaver somniferum
QL10p005240 Quercus lobata
RcHm_v2.0_Chr5g0026811 Rosa chinensis
RcHm_v2.0_Chr7g0191201 Rosa chinensis
Rhsim12G0172100 Rhododendron simsii
Sabra12G0067400 Salix brachista
Sabra15G0112600 Salix brachista
SalBow5G1916 Salvia bowleyana
SalBow5G4032 Salvia bowleyana
SalBow5G4699 Salvia bowleyana
Sc10g0010340 Simmondsia chinensis
Sed0010285 Sechium edule
SEGI_10248 Sequoiadendron giganteum
SEGI_27035 Sequoiadendron giganteum
SEGI_32601 Sequoiadendron giganteum
SGA_v2.0_scaffold338G49249 Striga asiatica
SMO137G0131 Selaginella moellendorffii
SMO137G0321 Selaginella moellendorffii
SMO137G0375 Selaginella moellendorffii
SMO170G0001 Selaginella moellendorffii
SMO170G0003 Selaginella moellendorffii
SMO170G0034 Selaginella moellendorffii
SMO170G0065 Selaginella moellendorffii
Solyc03g110910.4 Solanum lycopersicum
Sopen03g030100 Solanum pennellii
Sp6g12400 Schrenkiella parvula
TAR622G0515 Trochodendron aralioides
THA.LOC104803140 Tarenaya hassleriana
THA.LOC104811605 Tarenaya hassleriana
Thecc.03G122700 Theobroma cacao
Thhalv10013124m.g Eutrema salsugineum
TPR.G3286 Trifolium pratense
TWI14G0632 Tripterygium wilfordii
unitig_22.g5936 Utricularia gibba
vmacro16658 Vaccinium macrocarpon
vmacro16709 Vaccinium macrocarpon
vmacro23155 Vaccinium macrocarpon
VMungo1309G1699 Vigna mungo
Zm00001eb079280 Zea mays
Zm00001eb425150 Zea mays

User provided reference genes

Program Settings