Gene: Cc04_g10350

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc04_g10350
  • Transcript Identifier Cc04_g10350.1
  • Gene Type Coding gene
  • Location chr4 : 9624305-9629788 : negative

Gene Family Information

  • ID HOM05D004180
  • #Genes/#Species 169/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB Q7X7L3
  • UniProtKB B9IF53
  • UniProtKB I1JXG5
  • UniProtKB Q5ZHS1
  • UniProtKB Q93ZR1
  • UniProtKB F6GSF4
  • id GSCOCG00042583001

Descriptions

  • Description Elongator complex protein 3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051301
ISO
PLAZA Integrative Orthologycell division AT5G50320
GO:0035265
ISO
PLAZA Integrative Orthologyorgan growth AT5G50320
GO:0009294
ISO
PLAZA Integrative OrthologyDNA mediated transformation AT5G50320
GO:0010928
ISO
PLAZA Integrative Orthologyregulation of auxin mediated signaling pathway AT5G50320
GO:0090708
ISO
PLAZA Integrative Orthologyspecification of plant organ axis polarity AT5G50320
GO:2000025
ISO
PLAZA Integrative Orthologyregulation of leaf formation AT5G50320
GO:0002098
ISO
PLAZA Integrative OrthologytRNA wobble uridine modification AT5G50320

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0051536
IEA
InterProiron-sulfur cluster binding
GO:0008080
IEA
InterProN-acetyltransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G50320
GO:0000791
ISO
PLAZA Integrative Orthologyeuchromatin AT5G50320
GO:0033588
ISO
PLAZA Integrative Orthologyelongator holoenzyme complex AT5G50320
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G50320

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032432 Radical SAM, C-terminal extension
IPR034687 Elongator complex protein 3-like
IPR006638 Elp3/MiaB/NifB
IPR007197 Radical SAM
IPR016181 Acyl-CoA N-acyltransferase
IPR039661 ELP3/YhcC
IPR000182 GNAT domain
Mapman id Description
15.3.5.2.3 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.ELONGATOR transcription elongation complex.component ELP3