Gene: Os04g0484900

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os04g0484900
  • Transcript Identifier Os04t0484900-01
  • Gene Type Coding gene
  • Location chr04 : 24237289-24240663 : negative

Gene Family Information

  • ID HOM05D004180
  • #Genes/#Species 169/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os04t0484900-01
  • MSU-ID LOC_Os04g40840.1
  • symbol OsELP3
  • uniprot Q7X7L3

Descriptions

  • Description Ortholog of yeast ELP3, Catalytic subunit of Elongator, Leaf development, Meristem function, tRNA maturation and histone acetylation
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0002098
ISO
PLAZA Integrative OrthologytRNA wobble uridine modification AT5G50320
GO:2000025
ISO
PLAZA Integrative Orthologyregulation of leaf formation AT5G50320
GO:0090708
ISO
PLAZA Integrative Orthologyspecification of plant organ axis polarity AT5G50320
GO:0010928
ISO
PLAZA Integrative Orthologyregulation of auxin mediated signaling pathway AT5G50320
GO:0009294
ISO
PLAZA Integrative OrthologyDNA mediated transformation AT5G50320
GO:0035265
ISO
PLAZA Integrative Orthologyorgan growth AT5G50320
GO:0051301
ISO
PLAZA Integrative Orthologycell division AT5G50320
GO:0002926
IBA
GOA DatabasetRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation
GO:0008033
IEA
GOA DatabasetRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051536
IEA
GOA Databaseiron-sulfur cluster binding
GO:0051536
IEA
InterProiron-sulfur cluster binding
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0008080
IEA
GOA DatabaseN-acetyltransferase activity
GO:0008080
IEA
InterProN-acetyltransferase activity
GO:0106261
IEA
GOA DatabasetRNA uridine(34) acetyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016746
IEA
GOA Databaseacyltransferase activity
GO:0000049
IEA
GOA DatabasetRNA binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0051539
IEA
GOA Database4 iron, 4 sulfur cluster binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
GOA Databasecytoplasm
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G50320
GO:0000791
ISO
PLAZA Integrative Orthologyeuchromatin AT5G50320
GO:0005634
IBA
IEA
GOA Databasenucleus
GO:0033588
IBA
GOA Databaseelongator holoenzyme complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000182 GNAT domain
IPR016181 Acyl-CoA N-acyltransferase
IPR039661 ELP3/YhcC
IPR034687 Elongator complex protein 3-like
IPR006638 Elp3/MiaB/NifB
IPR007197 Radical SAM
IPR032432 Radical SAM, C-terminal extension
Mapman id Description
15.3.5.2.3 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.ELONGATOR transcription elongation complex.component ELP3