Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p03620 Brassica napus
A09p01610 Brassica napus
A09p01640 Brassica napus
A09p01660 Brassica napus
Aa31LG2G15640 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.138 Anthoceros agrestis
Actinidia16323 Actinidia chinensis
Ah.06g194350 Amaranthus hybridus
AL6G50970 Arabidopsis lyrata
AL7G13020 Arabidopsis lyrata
AL7G16310 Arabidopsis lyrata
Aqoxy1G00274 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EX6ZD6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I21QA9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V5338L Arachis hypogaea
AT4G34890 Arabidopsis thaliana
AT4G34900 Arabidopsis thaliana
ATR0605G208 Amborella trichopoda
ATR1126G083 Amborella trichopoda
Atru.chr3.2746 Acer truncatum
AUR62000107 Chenopodium quinoa
AUR62019282 Chenopodium quinoa
AUR62019283 Chenopodium quinoa
AUR62019284 Chenopodium quinoa
BcaB01g02071 Brassica carinata
BcaB01g02072 Brassica carinata
BcaC04g24043 Brassica carinata
BcaNung00646 Brassica carinata
BolC1t00384H Brassica oleracea
BolC9t53105H Brassica oleracea
BraA01t00348Z Brassica rapa
BraA09t35819Z Brassica rapa
C01p03910 Brassica napus
C09p01710 Brassica napus
CAN.G327.12 Capsicum annuum
CANSAT01G2178 Cannabis sativa
CARHR243170 Cardamine hirsuta
CARHR250380 Cardamine hirsuta
Carub.0007s0540 Capsella rubella
Ca_01292_v3 Cicer arietinum L.
CBR_g30957 Chara braunii
CBR_g30958 Chara braunii
Cc07_g19600 Coffea canephora
Cc07_g19610 Coffea canephora
CDE05G1887 Ceratophyllum demersum
CDE05G3370 Ceratophyllum demersum
Cfa009756 Carpinus fangiana
Cfa025145 Carpinus fangiana
Ciclev10014051m.g Citrus clementina
CiPaw.14G119800 Carya illinoinensis
ClCG03G013290 Citrullus lanatus
COL.COLO4_24873 Corchorus olitorius
COL.COLO4_24876 Corchorus olitorius
COL.COLO4_24880 Corchorus olitorius
Cpa.g.sc84.69 Carica papaya
Cre11.g467688 Chlamydomonas reinhardtii
Cre12.g545101 Chlamydomonas reinhardtii
CsaV3_1G042760 Cucumis sativus L.
CSS0021836 Camellia sinensis var. sinensis
CSS0033412 Camellia sinensis var. sinensis
CSS0047222 Camellia sinensis var. sinensis
CSS0047721 Camellia sinensis var. sinensis
CSS0049552 Camellia sinensis var. sinensis
DCAR_002067 Daucus carota
Dinv36267 Davidia involucrata
Duzib170G0402 Durio zibethinus
ECA238G2169 Erigeron canadensis
ECA238G2654 Erigeron canadensis
EL10Ac4g10130 Beta vulgaris
EL10Ac4g10132 Beta vulgaris
EL10Ac4g10154 Beta vulgaris
EL10Ac4g10159 Beta vulgaris
EL10Ac4g10161 Beta vulgaris
EL10Ac4g10268 Beta vulgaris
EL10Ac4g10284 Beta vulgaris
Eucgr.J00780 Eucalyptus grandis
Eucgr.J00782 Eucalyptus grandis
Eucgr.L00273 Eucalyptus grandis
FAN11G2909 Fragaria x ananassa
FAN21G2353 Fragaria x ananassa
FAN25G0972 Fragaria x ananassa
FAN25G2450 Fragaria x ananassa
FvH4_3g29000 Fragaria vesca
Glyma.13G340300 Glycine max
Glyma.15G034000 Glycine max
Gohir.A09G114800 Gossypium hirsutum
Gohir.A13G216501 Gossypium hirsutum
Gohir.D09G111500 Gossypium hirsutum
Gohir.D13G220125 Gossypium hirsutum
Gorai.006G129200 Gossypium raimondii
Gorai.013G251000 Gossypium raimondii
GSVIVG01025282001 Vitis vinifera
HanXRQChr07g0197511 Helianthus annuus
Haze_23121 Corylus avellana
Hma1.2p1_0861F.1_g229750 Hydrangea macrophylla
Hma1.2p1_0861F.1_g229780 Hydrangea macrophylla
Hma1.2p1_0861F.1_g229790 Hydrangea macrophylla
HPP92_023576 Vanilla planifolia
Hund22038 Selenicereus undatus
Lalb_Chr24g0397071 Lupinus albus
Lj2A632G19 Lonicera japonica
Lj3g0023347 Lotus japonicus
Lsat_1_v5_gn_2_97481 Lactuca sativa
Lsat_1_v5_gn_2_97521 Lactuca sativa
Manes.06G165500 Manihot esculenta
Mapoly0014s0136 Marchantia polymorpha
Mapoly0046s0052 Marchantia polymorpha
MBI01_g42707_MAGBIO Magnolia biondii
MCO15G310 Micromonas commoda
MD03G1177200 Malus domestica
MD11G1161000 Malus domestica
MD11G1197900 Malus domestica
Medtr2g098030 Medicago truncatula
MELO3C014095.2 Cucumis melo
MELO3C015199.2 Cucumis melo
MELO3C016640.2 Cucumis melo
MELO3C034647.2 Cucumis melo
Migut.D00590 Erythranthe guttata
Migut.D00593 Erythranthe guttata
MSTRG.18423 Avicennia marina
Nitab4.5_0001800g0150 Nicotiana tabacum
Nitab4.5_0006994g0020 Nicotiana tabacum
Nn2g15465 Nelumbo nucifera
Os03g0429800 Oryza sativa ssp. japonica
Peaxi162Scf01427g00007 Petunia axillaris
PGR119G0568 Punica granatum
Phvul.L009543 Phaseolus vulgaris
Potri.009G054600 Populus trichocarpa
Pp3c20_16340 Physcomitrium patens
Pp3c2_20120 Physcomitrium patens
PRCOL_00001493 Prasinoderma coloniale
PRCOL_00006722 Prasinoderma coloniale
Prupe.4G245700 Prunus persica
Psat0ss3005g0040 Pisum sativum
Psat5g286360 Pisum sativum
PSO384G0041 Papaver somniferum
PSO384G2146 Papaver somniferum
QL01p005011 Quercus lobata
RcHm_v2.0_Chr5g0051661 Rosa chinensis
Rhsim13G0222300 Rhododendron simsii
Sabra09G0039900 Salix brachista
Sc06g0004540 Simmondsia chinensis
Sed0014521 Sechium edule
SEGI_06462 Sequoiadendron giganteum
SEGI_08506 Sequoiadendron giganteum
SEGI_15558 Sequoiadendron giganteum
SEGI_18325 Sequoiadendron giganteum
SEGI_30496 Sequoiadendron giganteum
SGA_v2.0_scaffold247G44871 Striga asiatica
SHI29743 Sapria himalayana
SHI29744 Sapria himalayana
SHI29746 Sapria himalayana
SMO172G0195 Selaginella moellendorffii
SMO351G0580 Selaginella moellendorffii
Solyc11g065920.2 Solanum lycopersicum
Solyc11g065930.3 Solanum lycopersicum
Sopen11g025660 Solanum pennellii
Sopen11g025670 Solanum pennellii
Sp7g32650 Schrenkiella parvula
TAR622G0681 Trochodendron aralioides
TAR624G0113 Trochodendron aralioides
TAR633G1179 Trochodendron aralioides
TAR636G1523 Trochodendron aralioides
TAR636G2042 Trochodendron aralioides
THA.LOC104817905 Tarenaya hassleriana
Thecc.09G231100 Theobroma cacao
Thecc.09G231200 Theobroma cacao
Thecc.09G231300 Theobroma cacao
Thhalv10024224m.g Eutrema salsugineum
TPR.G6821 Trifolium pratense
TWI34G0448 Tripterygium wilfordii
unitig_90.g27489 Utricularia gibba
vmacro04203 Vaccinium macrocarpon
VMungo1080G0609 Vigna mungo
Zm00001eb021020 Zea mays
Zm00001eb027570 Zea mays

User provided reference genes

Program Settings