Gene: Solyc11g065930.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc11g065930.3
- Transcript Identifier Solyc11g065930.3.1
- Gene Type Coding gene
- Location SL4.0ch11 : 49562364-49574673 : negative
Gene Family Information
- ID HOM05D001013
- #Genes/#Species 597/100
- Phylogenetic origin
- ID ORTHO05D004597
- #Genes/#Species 176/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc11g065930.3.1
- uniprot A0A3Q7IYN3
- gene_id Solyc11g065930
Descriptions
- Description Xanthine dehydrogenase (AHRD V3.3 *** A0A2G2VNZ2_CAPBA)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT4G34890 |
| GO:0000302 | ISO | PLAZA Integrative Orthology | response to reactive oxygen species | AT4G34890 |
| GO:0042554 | ISO | PLAZA Integrative Orthology | superoxide anion generation | AT4G34890 |
| GO:0006145 | ISO | PLAZA Integrative Orthology | purine nucleobase catabolic process | AT4G34890 |
| GO:0046110 | ISO | PLAZA Integrative Orthology | xanthine metabolic process | AT4G34900 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016491 | IBA IEA | GOA Database | oxidoreductase activity | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0004854 | ISO | PLAZA Integrative Orthology | xanthine dehydrogenase activity | AT4G34890 |
| GO:0005506 | IEA | GOA Database | iron ion binding | |
| GO:0005506 | IEA | InterPro | iron ion binding | |
| GO:0050660 | IEA | GOA Database | flavin adenine dinucleotide binding | |
| GO:0050660 | IEA | InterPro | flavin adenine dinucleotide binding | |
| GO:0071949 | IEA | GOA Database | FAD binding | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0051536 | IEA | GOA Database | iron-sulfur cluster binding | |
| GO:0051536 | IEA | InterPro | iron-sulfur cluster binding | |
| GO:0051537 | IEA | GOA Database | 2 iron, 2 sulfur cluster binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT4G34890 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR008274 | Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding |
| IPR000674 | Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead |
| IPR037165 | Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily |
| IPR005107 | CO dehydrogenase flavoprotein, C-terminal |
| IPR002346 | Molybdopterin dehydrogenase, FAD-binding |
| IPR036683 | CO dehydrogenase flavoprotein, C-terminal domain superfamily |
| IPR016169 | FAD-binding, type PCMH, subdomain 2 |
| IPR016208 | Aldehyde oxidase/xanthine dehydrogenase |
| IPR012675 | Beta-grasp domain superfamily |
| IPR036318 | FAD-binding, type PCMH-like superfamily |
| IPR036884 | [2Fe-2S]-binding domain superfamily |
| IPR016167 | FAD-binding, type PCMH, subdomain 1 |
| IPR002888 | [2Fe-2S]-binding |
| IPR036010 | 2Fe-2S ferredoxin-like superfamily |
| IPR036856 | Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily |