Gene: Sopen11g025670
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g025670
- Transcript Identifier Sopen11g025670.2
- Gene Type Coding gene
- Location Spenn-ch11 : 61247150-61271261 : negative
Gene Family Information
- ID HOM05D001013
- #Genes/#Species 597/100
- Phylogenetic origin
- ID ORTHO05D004597
- #Genes/#Species 176/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Sopen11g025670.2
Descriptions
- Description Encodes a xanthine dehydrogenase, involved in purine catabolism. Ubiquitously expressed, but the transcript level is altered during aging, senescence, salt and cold stress, ABA treatment, and dark treatment. RNAi lines that suppress both XDH1 and XDH2 produce small plants with reduced fertility and accelerated leaf senescence. Role in drought tolerance. | xanthine dehydrogenase 1 (XDH1) | CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase , Ferredoxin , Molybdopterin dehydrogenase, FAD-binding , (2Fe-2S)-binding , FAD-binding, type 2, subdomain 1 , FAD-binding, type 2 , CO dehydrogenase flavoprotein, C-terminal , 2Fe-2S ferredoxin, iron-sulphur binding site , CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 , Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead , Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding | BEST Arabidopsis thaliana protein match is: xanthine dehydrogenase 2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046110 | ISO | PLAZA Integrative Orthology | xanthine metabolic process | AT4G34900 |
| GO:0006145 | ISO | PLAZA Integrative Orthology | purine nucleobase catabolic process | AT4G34890 |
| GO:0042554 | ISO | PLAZA Integrative Orthology | superoxide anion generation | AT4G34890 |
| GO:0000302 | ISO | PLAZA Integrative Orthology | response to reactive oxygen species | AT4G34890 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT4G34890 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005506 | IEA | InterPro | iron ion binding | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0051536 | IEA | InterPro | iron-sulfur cluster binding | |
| GO:0050660 | IEA | InterPro | flavin adenine dinucleotide binding | |
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0004854 | ISO | PLAZA Integrative Orthology | xanthine dehydrogenase activity | AT4G34890 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT4G34890 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036884 | [2Fe-2S]-binding domain superfamily |
| IPR016208 | Aldehyde oxidase/xanthine dehydrogenase |
| IPR036856 | Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily |
| IPR012675 | Beta-grasp domain superfamily |
| IPR036683 | CO dehydrogenase flavoprotein, C-terminal domain superfamily |
| IPR005107 | CO dehydrogenase flavoprotein, C-terminal |
| IPR000674 | Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead |
| IPR001041 | 2Fe-2S ferredoxin-type iron-sulfur binding domain |
| IPR002346 | Molybdopterin dehydrogenase, FAD-binding |
| IPR008274 | Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding |
| IPR016167 | FAD-binding, type PCMH, subdomain 1 |
| IPR036318 | FAD-binding, type PCMH-like superfamily |
| IPR037165 | Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily |
| IPR036010 | 2Fe-2S ferredoxin-like superfamily |
| IPR016169 | FAD-binding, type PCMH, subdomain 2 |
| IPR002888 | [2Fe-2S]-binding |