Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p00630 Brassica napus
A10p33320 Brassica napus
Aa31LG1G22450 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5255 Anthoceros agrestis
Actinidia11259 Actinidia chinensis
AL6G11560 Arabidopsis lyrata
Aqoxy2G02133 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.N5BDHI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VY3GX3 Arachis hypogaea
AT5G02310 Arabidopsis thaliana
ATR0559G162 Amborella trichopoda
Atru.chr8.1976 Acer truncatum
Atru.chr8.1977 Acer truncatum
Atru.chr8.1978 Acer truncatum
AUR62014948 Chenopodium quinoa
AUR62014950 Chenopodium quinoa
AUR62029189 Chenopodium quinoa
AUR62029193 Chenopodium quinoa
AUR62029194 Chenopodium quinoa
BcaB01g06158 Brassica carinata
BcaB01g06223 Brassica carinata
BcaC03g18435 Brassica carinata
BcaC03g18436 Brassica carinata
BcaC06g31982 Brassica carinata
BcaNung02121 Brassica carinata
BcaNung06990 Brassica carinata
BolC2t06043H Brassica oleracea
BolC3t12653H Brassica oleracea
BraA02t04715Z Brassica rapa
BraA03t09453Z Brassica rapa
BraA10t45363Z Brassica rapa
C02p00430 Brassica napus
C03p00900 Brassica napus
C09p74230 Brassica napus
CAN.G324.6 Capsicum annuum
CAN.G325.1 Capsicum annuum
CAN.G326.2 Capsicum annuum
CAN.G326.3 Capsicum annuum
CANSAT35G0056 Cannabis sativa
CARHR211070 Cardamine hirsuta
Carub.0006s0114 Capsella rubella
Ca_07551_v3 Cicer arietinum L.
CBR_g34200 Chara braunii
Cc06_g02620 Coffea canephora
CDE04G0526 Ceratophyllum demersum
CDE04G3033 Ceratophyllum demersum
Cfa017377 Carpinus fangiana
Cfa025161 Carpinus fangiana
Ciclev10013610m.g Citrus clementina
CiPaw.10G145700 Carya illinoinensis
ClCG10G021160 Citrullus lanatus
Cpa.g.sc228.13 Carica papaya
Cpa.g.sc228.14 Carica papaya
Cre02.g089237 Chlamydomonas reinhardtii
CsaV3_3G034880 Cucumis sativus L.
CSS0020509 Camellia sinensis var. sinensis
DCAR_009228 Daucus carota
Dinv35601 Davidia involucrata
Duzib106G0690 Durio zibethinus
Duzib128G0151 Durio zibethinus
ECA236G0128 Erigeron canadensis
ECA236G2192 Erigeron canadensis
EL10Ac9g22598 Beta vulgaris
Eucgr.A01266 Eucalyptus grandis
FAN02G2694 Fragaria x ananassa
FAN05G2232 Fragaria x ananassa
FAN09G1807 Fragaria x ananassa
FAN14G0142 Fragaria x ananassa
FvH4_6g13660 Fragaria vesca
Glyma.07G132300 Glycine max
Glyma.18G181200 Glycine max
Gohir.A01G222300 Gossypium hirsutum
Gohir.A09G155900 Gossypium hirsutum
Gohir.A13G093100 Gossypium hirsutum
Gohir.D01G211800 Gossypium hirsutum
Gohir.D09G151400 Gossypium hirsutum
Gohir.D13G098600 Gossypium hirsutum
Gorai.001G249500 Gossypium raimondii
Gorai.002G257600 Gossypium raimondii
Gorai.006G172700 Gossypium raimondii
GSVIVG01023054001 Vitis vinifera
GSVIVG01034167001 Vitis vinifera
GSVIVG01034169001 Vitis vinifera
HanXRQChr04g0125101 Helianthus annuus
HanXRQChr06g0177081 Helianthus annuus
HanXRQChr06g0179281 Helianthus annuus
Haze_03516 Corylus avellana
Haze_20793 Corylus avellana
Hma1.2p1_1899F.1_g306950 Hydrangea macrophylla
HPP92_012595 Vanilla planifolia
Lalb_Chr01g0022521 Lupinus albus
Lalb_Chr03g0042261 Lupinus albus
Lj1g0008992 Lotus japonicus
Lj3C967G6 Lonicera japonica
Lsat_1_v5_gn_4_33481 Lactuca sativa
Lsat_1_v5_gn_8_81981 Lactuca sativa
Manes.09G091838 Manihot esculenta
Mapoly0028s0055 Marchantia polymorpha
Mapoly0123s0014 Marchantia polymorpha
MBI14_g20100_MAGBIO Magnolia biondii
MBI14_g36919_MAGBIO Magnolia biondii
MBI19_g16672_MAGBIO Magnolia biondii
MCO04G508 Micromonas commoda
MD04G1129300 Malus domestica
MD12G1142100 Malus domestica
Medtr7g061540 Medicago truncatula
MELO3C009256.2 Cucumis melo
Migut.L01946 Erythranthe guttata
MSTRG.10258 Avicennia marina
Nitab4.5_0000202g0100 Nicotiana tabacum
Nitab4.5_0000216g0310 Nicotiana tabacum
Nitab4.5_0003845g0020 Nicotiana tabacum
Nitab4.5_0003845g0030 Nicotiana tabacum
Nitab4.5_0006677g0030 Nicotiana tabacum
Nitab4.5_0006677g0040 Nicotiana tabacum
Nn2g11106 Nelumbo nucifera
Oeu033326.1 Olea europaea
Oeu036137.1 Olea europaea
Oeu036138.2 Olea europaea
Oeu039697.1 Olea europaea
Oeu051935.1 Olea europaea
Oeu051936.1 Olea europaea
Os01g0148000 Oryza sativa ssp. japonica
Os01g0148050 Oryza sativa ssp. japonica
Peaxi162Scf00094g00138 Petunia axillaris
Peaxi162Scf00094g01313 Petunia axillaris
Peaxi162Scf00165g01216 Petunia axillaris
PGR004G0645 Punica granatum
Phvul.008G106950 Phaseolus vulgaris
Potri.006G085700 Populus trichocarpa
Pp3c10_20380 Physcomitrium patens
Pp3c15_3560 Physcomitrium patens
Pp3c17_2850 Physcomitrium patens
Pp3c22_8160 Physcomitrium patens
Pp3c2_29090 Physcomitrium patens
Pp3c3_24510 Physcomitrium patens
Pp3c3_37220 Physcomitrium patens
Pp3c7_22570 Physcomitrium patens
Pp3c8_2930 Physcomitrium patens
Pp3c8_2940 Physcomitrium patens
Pp3c9_4700 Physcomitrium patens
PRCOL_00001936 Prasinoderma coloniale
Prupe.6G255500 Prunus persica
Psat3g140000 Pisum sativum
PSO151G0112 Papaver somniferum
PSO339G2612 Papaver somniferum
QL07p048346 Quercus lobata
RcHm_v2.0_Chr3g0466531 Rosa chinensis
Rhsim05G0193000 Rhododendron simsii
Sabra06G0065100 Salix brachista
SalBow4G0433 Salvia bowleyana
Sc20g0004890 Simmondsia chinensis
Sc20g0004930 Simmondsia chinensis
Sc20g0004940 Simmondsia chinensis
Sed0016820 Sechium edule
Sed0022373 Sechium edule
SEGI_36024 Sequoiadendron giganteum
SGA_v2.0_scaffold35G14236 Striga asiatica
SGA_v2.0_scaffold94G28599 Striga asiatica
SHI12675 Sapria himalayana
SHI12676 Sapria himalayana
SHI12677 Sapria himalayana
SMO361G0120 Selaginella moellendorffii
SMO361G0552 Selaginella moellendorffii
Solyc09g010830.4 Solanum lycopersicum
Solyc10g084760.3 Solanum lycopersicum
Sopen09g005560 Solanum pennellii
Sopen10g034210 Solanum pennellii
Sp6g40140 Schrenkiella parvula
TAR369G0630 Trochodendron aralioides
TAR623G0018 Trochodendron aralioides
THA.LOC104816269 Tarenaya hassleriana
Thecc.05G039500 Theobroma cacao
Thhalv10012411m.g Eutrema salsugineum
TPR.G23256 Trifolium pratense
TWI74G1144 Tripterygium wilfordii
TWI77G0691 Tripterygium wilfordii
unitig_0.g701 Utricularia gibba
unitig_0.g702 Utricularia gibba
vmacro07102 Vaccinium macrocarpon
vmacro20159 Vaccinium macrocarpon
VMungo1383G2756 Vigna mungo
Zm00001eb124390 Zea mays

User provided reference genes

Program Settings