Gene: Solyc09g010830.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc09g010830.4
  • Transcript Identifier Solyc09g010830.4.1
  • Gene Type Coding gene
  • Location SL4.0ch09 : 4166354-4185064 : negative

Gene Family Information

  • ID HOM05D003688
  • #Genes/#Species 186/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc09g010830.4.1
  • uniprot A0A3Q7IU45
  • gene_id Solyc09g010830

Descriptions

  • Description E3 ubiquitin-protein ligase ubr3-like protein (AHRD V3.3 *** A0A2K3NLG7_TRIPR)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010025
ISO
PLAZA Integrative Orthologywax biosynthetic process AT5G02310
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT5G02310
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT5G02310
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT5G02310
GO:0010029
ISO
PLAZA Integrative Orthologyregulation of seed germination AT5G02310
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT5G02310
GO:0006723
ISO
PLAZA Integrative Orthologycuticle hydrocarbon biosynthetic process AT5G02310
GO:0050994
ISO
PLAZA Integrative Orthologyregulation of lipid catabolic process AT5G02310
GO:0071596
IBA
IEA
GOA Databaseubiquitin-dependent protein catabolic process via the N-end rule pathway
GO:0071596
IEA
InterProubiquitin-dependent protein catabolic process via the N-end rule pathway
GO:0016567
IBA
IEA
GOA Databaseprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
ISO
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT5G02310
GO:0061630
IBA
IEA
GOA Databaseubiquitin protein ligase activity
GO:0061630
IEA
InterProubiquitin protein ligase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000151
IBA
GOA Databaseubiquitin ligase complex
GO:0005737
IBA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044046 E3 ubiquitin-protein ligase UBR-like, C-terminal
IPR039164 E3 ubiquitin-protein ligase UBR1-like
IPR003126 Zinc finger, UBR-type
IPR036390 Winged helix DNA-binding domain superfamily
Mapman id Description
19.2.1.2.2.1 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Arg/N-degron pathway.Arg/N-recognin activities.type-I-residues E3 ubiquitin ligase (PRT6)