Gene: SGA_v2.0_scaffold94G28599

General Information

Structural Information

Species Striga asiatica
Gene Identifier SGA_v2.0_scaffold94G28599
Transcript Identifier SGA_v2.0_scaffold94T28599
Gene Type Coding gene
Location scaffold94 : 982262-993889 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D003688
#Genes/#Species 186/96
Phylogenetic origin

ID ORTHO05D004338
#Genes/#Species 183/96
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

Descriptions

Short descriptions
Ortholog descriptions

product E3 ubiquitin-protein ligase ubr1

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0071596	IEA	InterPro	ubiquitin-dependent protein catabolic process via the N-end rule pathway
GO:0050994	ISO	PLAZA Integrative Orthology	regulation of lipid catabolic process	AT5G02310
GO:0006723	ISO	PLAZA Integrative Orthology	cuticle hydrocarbon biosynthetic process	AT5G02310
GO:0009737	ISO	PLAZA Integrative Orthology	response to abscisic acid	AT5G02310
GO:0010029	ISO	PLAZA Integrative Orthology	regulation of seed germination	AT5G02310
GO:0050832	ISO	PLAZA Integrative Orthology	defense response to fungus	AT5G02310
GO:0042742	ISO	PLAZA Integrative Orthology	defense response to bacterium	AT5G02310
GO:0006511	ISO	PLAZA Integrative Orthology	ubiquitin-dependent protein catabolic process	AT5G02310
GO:0010025	ISO	PLAZA Integrative Orthology	wax biosynthetic process	AT5G02310

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008270	IEA	InterPro	zinc ion binding
GO:0061630	IEA	InterPro	ubiquitin protein ligase activity
GO:0004842	ISO	PLAZA Integrative Orthology	ubiquitin-protein transferase activity	AT5G02310

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR003126	Zinc finger, UBR-type
IPR039164	E3 ubiquitin-protein ligase UBR1-like
IPR036390	Winged helix DNA-binding domain superfamily
IPR042065	E3 ubiquitin-protein ligase ELL-like
IPR044046	E3 ubiquitin-protein ligase UBR-like, C-terminal

Mapman id	Description
19.2.1.2.2.1	Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Arg/N-degron pathway.Arg/N-recognin activities.type-I-residues E3 ubiquitin ligase (PRT6)