Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p21280 Brassica napus
A06p17800 Brassica napus
A07p14950 Brassica napus
A08p28840 Brassica napus
Aa31LG7G5690 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4983 Anthoceros agrestis
Actinidia03418 Actinidia chinensis
Actinidia03454 Actinidia chinensis
Actinidia15230 Actinidia chinensis
Actinidia21304 Actinidia chinensis
Actinidia28323 Actinidia chinensis
Ah.10g029910 Amaranthus hybridus
Ah.12g064800 Amaranthus hybridus
AL1G34890 Arabidopsis lyrata
AL2G37640 Arabidopsis lyrata
AL76U10010 Arabidopsis lyrata
AL8G20760 Arabidopsis lyrata
Aqoxy6G00260 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.J0H6IE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XA2R2M Arachis hypogaea
AT1G21720 Arabidopsis thaliana
AT1G77440 Arabidopsis thaliana
ATR0665G267 Amborella trichopoda
Atru.chr13.1516 Acer truncatum
Atru.chr2.236 Acer truncatum
AUR62031691 Chenopodium quinoa
AUR62032572 Chenopodium quinoa
BcaB03g12776 Brassica carinata
BcaB03g12778 Brassica carinata
BcaB03g14256 Brassica carinata
BcaB07g32169 Brassica carinata
BcaC03g15738 Brassica carinata
BcaC05g26091 Brassica carinata
BcaC06g34901 Brassica carinata
BcaC07g39113 Brassica carinata
BcaC07g39121 Brassica carinata
BolC2t09484H Brassica oleracea
BolC5t30768H Brassica oleracea
BolC7t42730H Brassica oleracea
BolC8t49739H Brassica oleracea
BolC8t49746H Brassica oleracea
BraA02t07146Z Brassica rapa
BraA06t24873Z Brassica rapa
BraA07t29241Z Brassica rapa
BraA08t34814Z Brassica rapa
C02p34590 Brassica napus
C05p20690 Brassica napus
C07p22000 Brassica napus
C08p21020 Brassica napus
C08p21090 Brassica napus
CAN.G186.3 Capsicum annuum
CAN.G694.13 Capsicum annuum
CANSAT64G0617 Cannabis sativa
CARHR022080 Cardamine hirsuta
CARHR022090 Cardamine hirsuta
CARHR070960 Cardamine hirsuta
Carub.0001s2116 Capsella rubella
Carub.0002s2433 Capsella rubella
Ca_08349_v3 Cicer arietinum L.
CBR_g8584 Chara braunii
Cc10_g12240 Coffea canephora
CDE02G4797 Ceratophyllum demersum
CDE08G0451 Ceratophyllum demersum
Ciclev10002515m.g Citrus clementina
CiPaw.15G034300 Carya illinoinensis
CiPaw.16G025700 Carya illinoinensis
ClCG08G005890 Citrullus lanatus
COL.COLO4_09706 Corchorus olitorius
COL.COLO4_27674 Corchorus olitorius
COL.COLO4_37931 Corchorus olitorius
Cpa.g.sc64.119 Carica papaya
Cre06.g267500 Chlamydomonas reinhardtii
CsaV3_6G034220 Cucumis sativus L.
CSS0005687 Camellia sinensis var. sinensis
CSS0020897 Camellia sinensis var. sinensis
DCAR_003564 Daucus carota
Dinv14644 Davidia involucrata
Dinv27284 Davidia involucrata
Duzib041G0810 Durio zibethinus
Duzib093G1643 Durio zibethinus
Duzib116G0378 Durio zibethinus
ECA246G2935 Erigeron canadensis
EL10Ac2g02722 Beta vulgaris
Eucgr.F04339 Eucalyptus grandis
FAN15G3634 Fragaria x ananassa
FAN20G0745 Fragaria x ananassa
FAN24G3414 Fragaria x ananassa
FAN27G1520 Fragaria x ananassa
FvH4_2g27460 Fragaria vesca
Glyma.04G249300 Glycine max
Glyma.06G113600 Glycine max
Glyma.13G031200 Glycine max
Glyma.14G152900 Glycine max
Gohir.A02G072200 Gossypium hirsutum
Gohir.A05G269100 Gossypium hirsutum
Gohir.A06G046300 Gossypium hirsutum
Gohir.D02G079400 Gossypium hirsutum
Gohir.D05G271000 Gossypium hirsutum
Gohir.D06G046700 Gossypium hirsutum
Gorai.005G088700 Gossypium raimondii
Gorai.009G283900 Gossypium raimondii
Gorai.010G052100 Gossypium raimondii
GSVIVG01008836001 Vitis vinifera
HanXRQChr05g0149801 Helianthus annuus
HanXRQChr09g0241421 Helianthus annuus
HanXRQChr11g0353161 Helianthus annuus
Haze_17514 Corylus avellana
Haze_26528 Corylus avellana
Hund26793 Selenicereus undatus
Lalb_Chr14g0363021 Lupinus albus
Lalb_Chr23g0271041 Lupinus albus
Lj1g0018463 Lotus japonicus
Lj1g0026115 Lotus japonicus
Lj4A634T18 Lonicera japonica
Lj7A345G35 Lonicera japonica
Lsat_1_v5_gn_6_110200 Lactuca sativa
Manes.18G079800 Manihot esculenta
Mapoly0009s0221 Marchantia polymorpha
MBI18_g06041_MAGBIO Magnolia biondii
MBI19_g24072_MAGBIO Magnolia biondii
MCO04G134 Micromonas commoda
MD00G1028400 Malus domestica
MD15G1344700 Malus domestica
Medtr4g087680 Medicago truncatula
Medtr7g088490 Medicago truncatula
MELO3C000762.2 Cucumis melo
MELO3C010635.2 Cucumis melo
Migut.C01112 Erythranthe guttata
MSTRG.1425 Avicennia marina
Nitab4.5_0001436g0070 Nicotiana tabacum
Nitab4.5_0004105g0060 Nicotiana tabacum
Nitab4.5_0005183g0080 Nicotiana tabacum
Nitab4.5_0013462g0020 Nicotiana tabacum
Nn1g08872 Nelumbo nucifera
Nn1g08885 Nelumbo nucifera
Nn5g28369 Nelumbo nucifera
Oeu001543.1 Olea europaea
Oeu059454.1 Olea europaea
Os02g0182500 Oryza sativa ssp. japonica
Os06g0643100 Oryza sativa ssp. japonica
Peaxi162Scf00156g00512 Petunia axillaris
Peaxi162Scf00842g00320 Petunia axillaris
PGR042G0208 Punica granatum
PGSC0003DMG400032557 Solanum tuberosum
Phvul.001G072000 Phaseolus vulgaris
Potri.002G080800 Populus trichocarpa
Potri.005G180500 Populus trichocarpa
Pp3c11_25990 Physcomitrium patens
Pp3c7_520 Physcomitrium patens
PRCOL_00003399 Prasinoderma coloniale
Prupe.1G492900 Prunus persica
Prupe.7G146500 Prunus persica
Psat3g083080 Pisum sativum
PSO017G2497 Papaver somniferum
PSO170G6731 Papaver somniferum
QL09p033791 Quercus lobata
RcHm_v2.0_Chr2g0103031 Rosa chinensis
RcHm_v2.0_Chr6g0296301 Rosa chinensis
Rhsim06G0101000 Rhododendron simsii
Rhsim06G0101600 Rhododendron simsii
Rhsim11G0070000 Rhododendron simsii
Sabra02G0063300 Salix brachista
Sabra05G0136500 Salix brachista
SalBow7G1033 Salvia bowleyana
Sc15g0002950 Simmondsia chinensis
Sed0026626 Sechium edule
Sed0028018 Sechium edule
SEGI_05988 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10436 Striga asiatica
SHI38232 Sapria himalayana
SMO351G0402 Selaginella moellendorffii
Solyc04g009410.3 Solanum lycopersicum
Sopen04g004540 Solanum pennellii
Sp1g19280 Schrenkiella parvula
Sp5g32590 Schrenkiella parvula
TAR365G0104 Trochodendron aralioides
TAR376G0833 Trochodendron aralioides
THA.LOC104800211 Tarenaya hassleriana
THA.LOC104804987 Tarenaya hassleriana
THA.LOC104807028 Tarenaya hassleriana
THA.LOC104813671 Tarenaya hassleriana
Thecc.08G129300 Theobroma cacao
Thhalv10008793m.g Eutrema salsugineum
Thhalv10019145m.g Eutrema salsugineum
TPR.G27967 Trifolium pratense
TWI32G1181 Tripterygium wilfordii
TWI34G0148 Tripterygium wilfordii
TWI60G0392 Tripterygium wilfordii
unitig_21.g20537 Utricularia gibba
vmacro00850 Vaccinium macrocarpon
VMungo0647G0803 Vigna mungo
VMungo1309G2538 Vigna mungo
Zm00001eb234190 Zea mays
Zm00001eb275340 Zea mays
Zm00001eb387100 Zea mays

User provided reference genes

Program Settings