Gene: Sopen04g004540

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g004540
  • Transcript Identifier Sopen04g004540.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 3005318-3009621 : positive

Gene Family Information

  • ID HOM05D002121
  • #Genes/#Species 315/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g004540.1

Descriptions

  • Description 20S proteasome beta subunit PBC1 truncated protein (PBC1) | proteasome beta subunit C1 (PBC1) | FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity | INVOLVED IN: ubiquitin-dependent protein catabolic process | LOCATED IN: proteasome core complex, proteasome complex, plasma membrane | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site , Proteasome, subunit alpha/beta | BEST Arabidopsis thaliana protein match is: 20S proteasome beta subunit C2
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043161
IEA
InterProproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051603
IEA
InterProproteolysis involved in cellular protein catabolic process
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT1G21720

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019774
IEA
InterProproteasome core complex, beta-subunit complex
GO:0005839
IEA
InterProproteasome core complex
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G21720
GO:0000502
ISO
PLAZA Integrative Orthologyproteasome complex AT1G21720
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT1G21720

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029055 Nucleophile aminohydrolases, N-terminal
IPR033811 Proteasome beta 3 subunit
IPR001353 Proteasome, subunit alpha/beta
Mapman id Description
19.2.5.1.2.3 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.20S core particle.beta-type components.component beta type-3