Gene: Pp3c11_25990
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c11_25990
- Transcript Identifier Pp3c11_25990V3.2
- Gene Type Coding gene
- Location Chr11 : 16896198-16897769 : negative
Gene Family Information
- ID HOM05D002121
- #Genes/#Species 315/100
- Phylogenetic origin
- ID ORTHO05D004000
- #Genes/#Species 195/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c11_25990V3.2
- pacid 32958711
- alias Phpat.011G103900
- alias Phypa_167139
- alias Pp1s138_33V6
- uniprot A9SYM6
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006511 | ISO | PLAZA Integrative Orthology | ubiquitin-dependent protein catabolic process | AT1G21720 |
| GO:0010498 | IBA | GOA Database | proteasomal protein catabolic process | |
| GO:0051603 | IEA | GOA Database | proteolysis involved in cellular protein catabolic process | |
| GO:0051603 | IEA | InterPro | proteolysis involved in cellular protein catabolic process | |
| GO:0043161 | IEA | GOA Database | proteasome-mediated ubiquitin-dependent protein catabolic process | |
| GO:0043161 | IEA | InterPro | proteasome-mediated ubiquitin-dependent protein catabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004298 | IEA | GOA Database | threonine-type endopeptidase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019774 | IBA IEA | GOA Database | proteasome core complex, beta-subunit complex | |
| GO:0019774 | IEA | InterPro | proteasome core complex, beta-subunit complex | |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT1G21720 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G21720 |
| GO:0005839 | IBA IEA | GOA Database | proteasome core complex | |
| GO:0005839 | IEA | InterPro | proteasome core complex | |
| GO:0000502 | IEA | GOA Database | proteasome complex | |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005737 | IEA | GOA Database | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.2.5.1.2.3 | Protein homeostasis.ubiquitin-proteasome system.26S proteasome.20S core particle.beta-type components.component beta type-3 |