Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p13030 Brassica napus
A03p52880 Brassica napus
A08p15430 Brassica napus
Aa31LG6G3690 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.446 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.461 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.491 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.366 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.381 Anthoceros agrestis
Actinidia01884 Actinidia chinensis
Actinidia05632 Actinidia chinensis
Ah.09g237340 Amaranthus hybridus
AL7G32230 Arabidopsis lyrata
Aqoxy4G00850 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GL1MLB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NAU6LA Arachis hypogaea
AT4G21710 Arabidopsis thaliana
ATR0737G155 Amborella trichopoda
ATR0737G182 Amborella trichopoda
Atru.chr11.1223 Acer truncatum
AUR62014817 Chenopodium quinoa
AUR62017013 Chenopodium quinoa
BcaB02g09516 Brassica carinata
BcaB03g11682 Brassica carinata
BcaB03g11712 Brassica carinata
BcaC01g00682 Brassica carinata
BcaC01g00737 Brassica carinata
BcaC02g12516 Brassica carinata
BcaC09g51213 Brassica carinata
BcaNung00842 Brassica carinata
BcaNung02240 Brassica carinata
BolC1t01523H Brassica oleracea
BolC3t20588H Brassica oleracea
BolC3t20648H Brassica oleracea
BolC4t21826H Brassica oleracea
BolC4t21829H Brassica oleracea
BolC4t21836H Brassica oleracea
BolC4t21839H Brassica oleracea
BolC4t21840H Brassica oleracea
BolC4t21841H Brassica oleracea
BolC7t45632H Brassica oleracea
BraA01t01245Z Brassica rapa
BraA03t14364Z Brassica rapa
BraA08t33480Z Brassica rapa
BraA08t33520Z Brassica rapa
C01p15700 Brassica napus
C03p83690 Brassica napus
C04p01740 Brassica napus
C07p51330 Brassica napus
CAN.G1164.28 Capsicum annuum
CAN.G318.1 Capsicum annuum
CANSAT35G0904 Cannabis sativa
CARHR228440 Cardamine hirsuta
Carub.0007s1969 Capsella rubella
Ca_13395_v3 Cicer arietinum L.
CBR_g18979 Chara braunii
CBR_g45284 Chara braunii
CBR_g49614 Chara braunii
CBR_g59394 Chara braunii
Cc02_g13320 Coffea canephora
Cc05_g07140 Coffea canephora
CDE05G0635 Ceratophyllum demersum
CDE05G2987 Ceratophyllum demersum
CDE11G0080 Ceratophyllum demersum
Cfa000445 Carpinus fangiana
Cfa023085 Carpinus fangiana
Ciclev10027701m.g Citrus clementina
CiPaw.09G059500 Carya illinoinensis
ClCG01G022970 Citrullus lanatus
COL.COLO4_31478 Corchorus olitorius
Cpa.g.sc27.44 Carica papaya
Cre02.g075150 Chlamydomonas reinhardtii
CsaV3_6G050130 Cucumis sativus L.
CSS0000721 Camellia sinensis var. sinensis
CSS0003979 Camellia sinensis var. sinensis
CSS0012596 Camellia sinensis var. sinensis
DCAR_004076 Daucus carota
Dinv07557 Davidia involucrata
Dinv26418 Davidia involucrata
Duzib192G0348 Durio zibethinus
ECA234G4696 Erigeron canadensis
ECA236G3242 Erigeron canadensis
EL10Ac8g20379 Beta vulgaris
Eucgr.E03313 Eucalyptus grandis
FAN11G0358 Fragaria x ananassa
FAN16G0545 Fragaria x ananassa
FAN16G2750 Fragaria x ananassa
FAN16G3497 Fragaria x ananassa
FAN21G2802 Fragaria x ananassa
FAN25G1703 Fragaria x ananassa
FvH4_3g09270 Fragaria vesca
Glyma.09G066000 Glycine max
Glyma.15G073766 Glycine max
Glyma.15G073832 Glycine max
Glyma.15G172100 Glycine max
Gohir.A06G210100 Gossypium hirsutum
Gohir.D06G210900 Gossypium hirsutum
Gorai.010G255400 Gossypium raimondii
GSVIVG01020543001 Vitis vinifera
HanXRQChr04g0124051 Helianthus annuus
HanXRQChr15g0482411 Helianthus annuus
HanXRQChr15g0482421 Helianthus annuus
Haze_06470 Corylus avellana
Haze_26624 Corylus avellana
Haze_26872 Corylus avellana
Hma1.2p1_0785F.1_g217570 Hydrangea macrophylla
Hma1.2p1_1038F.1_g250690 Hydrangea macrophylla
Hma1.2p1_1038F.1_g250700 Hydrangea macrophylla
Hma1.2p1_1295F.1_g273910 Hydrangea macrophylla
HPP92_007278 Vanilla planifolia
Hund21226 Selenicereus undatus
Hund23734 Selenicereus undatus
Lalb_Chr18g0059641 Lupinus albus
Lalb_Chr20g0121921 Lupinus albus
Lj2A288T66 Lonicera japonica
Lj6g0001113 Lotus japonicus
Lsat_1_v5_gn_7_21181 Lactuca sativa
Lsat_1_v5_gn_7_21201 Lactuca sativa
Lsat_1_v5_gn_7_21221 Lactuca sativa
Lsat_1_v5_gn_8_110820 Lactuca sativa
Manes.16G027100 Manihot esculenta
Mapoly0101s0062 Marchantia polymorpha
MBI16_g05843_MAGBIO Magnolia biondii
MCO09G805 Micromonas commoda
MD05G1313100 Malus domestica
MD10G1295300 Malus domestica
Medtr1g023500 Medicago truncatula
MELO3C007284.2 Cucumis melo
Migut.H01489 Erythranthe guttata
Migut.M00297 Erythranthe guttata
MSTRG.13196 Avicennia marina
Nitab4.5_0003432g0020 Nicotiana tabacum
Nitab4.5_0006194g0070 Nicotiana tabacum
Nitab4.5_0006627g0030 Nicotiana tabacum
Nitab4.5_0007940g0010 Nicotiana tabacum
Nitab4.5_0012085g0010 Nicotiana tabacum
Nn1g06567 Nelumbo nucifera
Oeu005078.2 Olea europaea
Oeu064778.1 Olea europaea
Os03g0646800 Oryza sativa ssp. japonica
Peaxi162Scf00008g00818 Petunia axillaris
Peaxi162Scf00661g00520 Petunia axillaris
Peaxi162Scf00661g00526 Petunia axillaris
PGR042G1062 Punica granatum
PGSC0003DMG400007877 Solanum tuberosum
PGSC0003DMG400029721 Solanum tuberosum
Phvul.006G185800 Phaseolus vulgaris
Phvul.009G230400 Phaseolus vulgaris
Potri.004G043200 Populus trichocarpa
Pp3c1_31220 Physcomitrium patens
Pp3c2_10910 Physcomitrium patens
PRCOL_00001694 Prasinoderma coloniale
Prupe.4G046700 Prunus persica
Psat0s3839g0040 Pisum sativum
Psat6g005080 Pisum sativum
PSO210G4503 Papaver somniferum
PSO832G3847 Papaver somniferum
QL05p040208 Quercus lobata
RcHm_v2.0_Chr2g0110311 Rosa chinensis
RcHm_v2.0_Chr5g0008301 Rosa chinensis
Rhsim02G0128600 Rhododendron simsii
Rhsim06G0142300 Rhododendron simsii
Sabra04G0026800 Salix brachista
SalBow7G3779 Salvia bowleyana
SalBow7G4708 Salvia bowleyana
Sc17g0006210 Simmondsia chinensis
Sed0007750 Sechium edule
Sed0011517 Sechium edule
SEGI_19234 Sequoiadendron giganteum
SEGI_37407 Sequoiadendron giganteum
SGA_v2.0_scaffold159G37644 Striga asiatica
SGA_v2.0_scaffold70G23467 Striga asiatica
SHI01731 Sapria himalayana
SMO137G0267 Selaginella moellendorffii
Solyc02g078260.3 Solanum lycopersicum
Solyc12g010600.3 Solanum lycopersicum
Sopen02g023120 Solanum pennellii
Sopen12g005620 Solanum pennellii
Sp7g19860 Schrenkiella parvula
TAR624G0154 Trochodendron aralioides
TAR626G0729 Trochodendron aralioides
THA.LOC104806288 Tarenaya hassleriana
THA.LOC104812869 Tarenaya hassleriana
Thecc.06G188300 Theobroma cacao
Thhalv10024251m.g Eutrema salsugineum
TPR.G15003 Trifolium pratense
TPR.G15359 Trifolium pratense
TPR.G15368 Trifolium pratense
TPR.G34361 Trifolium pratense
TPR.G6631 Trifolium pratense
TWI63G0555 Tripterygium wilfordii
unitig_26.g9362 Utricularia gibba
vmacro12301 Vaccinium macrocarpon
vmacro15903 Vaccinium macrocarpon
VMungo0331G0170 Vigna mungo
VMungo0540G1699 Vigna mungo
VMungo1309G0707 Vigna mungo
VMungo1309G0724 Vigna mungo
Zm00001eb050350 Zea mays
Zm00001eb218650 Zea mays

User provided reference genes

Program Settings