Gene: SGA_v2.0_scaffold159G37644

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold159G37644
  • Transcript Identifier SGA_v2.0_scaffold159T37644
  • Gene Type Coding gene
  • Location scaffold159 : 475886-485846 : positive

Gene Family Information

  • ID HOM05D000688
  • #Genes/#Species 832/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product DNA-directed RNA polymerase family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0035196
ISO
PLAZA Integrative Orthologyproduction of miRNAs involved in gene silencing by miRNA AT4G21710

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity
GO:0032549
IEA
InterProribonucleoside binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT4G21710
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G21710
GO:0005665
ISO
PLAZA Integrative OrthologyRNA polymerase II, core complex AT4G21710

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain
IPR007646 RNA polymerase Rpb2, domain 4
IPR007647 RNA polymerase Rpb2, domain 5
IPR015712 DNA-directed RNA polymerase, subunit 2
IPR007645 RNA polymerase Rpb2, domain 3
IPR007644 RNA polymerase, beta subunit, protrusion
IPR007641 RNA polymerase Rpb2, domain 7
IPR007642 RNA polymerase Rpb2, domain 2
IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily
IPR014724 RNA polymerase Rpb2, OB-fold
Mapman id Description
15.1.2.2 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic components.subunit 2