Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p09280 Brassica napus
A03p58990 Brassica napus
A03p59000 Brassica napus
A05p20750 Brassica napus
A07p01170 Brassica napus
Aa31LG2G20920 Aethionema arabicum
Aa31LG8G16580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.3134 Anthoceros agrestis
Actinidia25258 Actinidia chinensis
Ah.14g085250 Amaranthus hybridus
AL3G48670 Arabidopsis lyrata
AL682U10010 Arabidopsis lyrata
AL7G22720 Arabidopsis lyrata
AL7G22740 Arabidopsis lyrata
AL7G22750 Arabidopsis lyrata
AL7G22770 Arabidopsis lyrata
AL7G22780 Arabidopsis lyrata
AL7G22810 Arabidopsis lyrata
Aqoxy7G01240 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.ME19SE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N198RB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YN7FFH Arachis hypogaea
AT2G19570 Arabidopsis thaliana
AT4G29570 Arabidopsis thaliana
AT4G29580 Arabidopsis thaliana
AT4G29600 Arabidopsis thaliana
AT4G29610 Arabidopsis thaliana
AT4G29620 Arabidopsis thaliana
AT4G29630 Arabidopsis thaliana
AT4G29640 Arabidopsis thaliana
AT4G29650 Arabidopsis thaliana
ATR0716G029 Amborella trichopoda
Atru.chr7.1575 Acer truncatum
AUR62027484 Chenopodium quinoa
AUR62033993 Chenopodium quinoa
BcaB03g16745 Brassica carinata
BcaC06g36599 Brassica carinata
BcaC06g36600 Brassica carinata
BcaC09g51742 Brassica carinata
BcaNung00481 Brassica carinata
BolC7t40640H Brassica oleracea
BolC7t46172H Brassica oleracea
BolC7t46173H Brassica oleracea
BraA03t10249Z Brassica rapa
BraA03t14958Z Brassica rapa
BraA03t14959Z Brassica rapa
BraA05t20983Z Brassica rapa
C07p02310 Brassica napus
C07p56970 Brassica napus
C07p57000 Brassica napus
C07p57030 Brassica napus
C07p57040 Brassica napus
C09p14740 Brassica napus
CAN.G371.125 Capsicum annuum
CAN.G771.2 Capsicum annuum
CANSAT56G1065 Cannabis sativa
CANSAT56G2773 Cannabis sativa
CARHR110010 Cardamine hirsuta
CARHR237400 Cardamine hirsuta
CARHR237410 Cardamine hirsuta
CARHR237490 Cardamine hirsuta
Carub.0003s3386 Capsella rubella
Carub.0007s1093 Capsella rubella
Carub.0007s1094 Capsella rubella
Carub.0007s1096 Capsella rubella
Ca_17403_v3 Cicer arietinum L.
Ca_25622_v3 Cicer arietinum L.
CBR_g7991 Chara braunii
Cc06_g04870 Coffea canephora
Cc06_g11280 Coffea canephora
CDE05G0195 Ceratophyllum demersum
CDE05G2742 Ceratophyllum demersum
Cfa003099 Carpinus fangiana
Ciclev10008864m.g Citrus clementina
CiPaw.03G217400 Carya illinoinensis
ClCG03G015690 Citrullus lanatus
COL.COLO4_18213 Corchorus olitorius
Cpa.g.c31168 Carica papaya
Cre13.g570550 Chlamydomonas reinhardtii
CsaV3_1G040320 Cucumis sativus L.
CSS0011012 Camellia sinensis var. sinensis
CSS0013498 Camellia sinensis var. sinensis
DCAR_024687 Daucus carota
Dinv21872 Davidia involucrata
Dinv32123 Davidia involucrata
Dinv36756 Davidia involucrata
Dinv42311 Davidia involucrata
Duzib168G0375 Durio zibethinus
Duzib187G1696 Durio zibethinus
ECA234G2307 Erigeron canadensis
ECA240G2674 Erigeron canadensis
EL10Ac8g19236 Beta vulgaris
Eucgr.C00902 Eucalyptus grandis
FAN19G2283 Fragaria x ananassa
FAN23G1917 Fragaria x ananassa
FAN26G1922 Fragaria x ananassa
FAN26G3264 Fragaria x ananassa
FAN28G1682 Fragaria x ananassa
FvH4_1g07230 Fragaria vesca
Glyma.05G222300 Glycine max
Glyma.07G129300 Glycine max
Glyma.08G029000 Glycine max
Gohir.A05G029400 Gossypium hirsutum
Gohir.A08G245300 Gossypium hirsutum
Gohir.A13G193500 Gossypium hirsutum
Gohir.D05G030900 Gossypium hirsutum
Gohir.D08G266301 Gossypium hirsutum
Gohir.D13G199300 Gossypium hirsutum
Gorai.004G284000 Gossypium raimondii
Gorai.009G031100 Gossypium raimondii
Gorai.013G228000 Gossypium raimondii
GSVIVG01015216001 Vitis vinifera
HanXRQChr03g0060791 Helianthus annuus
HanXRQChr10g0319261 Helianthus annuus
Haze_25901 Corylus avellana
Hma1.2p1_0800F.1_g220060 Hydrangea macrophylla
HPP92_011470 Vanilla planifolia
Lalb_Chr05g0223631 Lupinus albus
Lalb_Chr24g0393781 Lupinus albus
Lj2g0012329 Lotus japonicus
Lj4g0006501 Lotus japonicus
Lj7P674T24 Lonicera japonica
Lsat_1_v5_gn_5_145481 Lactuca sativa
Lsat_1_v5_gn_7_37501 Lactuca sativa
Manes.01G223600 Manihot esculenta
Manes.05G000800 Manihot esculenta
Mapoly0047s0014 Marchantia polymorpha
MCO11G152 Micromonas commoda
MD02G1076800 Malus domestica
MD15G1205500 Malus domestica
Medtr6g092660 Medicago truncatula
Medtr8g101570 Medicago truncatula
MELO3C015459.2 Cucumis melo
Migut.H01158 Erythranthe guttata
Migut.H01162 Erythranthe guttata
Migut.J00599 Erythranthe guttata
MSTRG.17772 Avicennia marina
MSTRG.19521 Avicennia marina
MSTRG.6051 Avicennia marina
Nitab4.5_0006935g0010 Nicotiana tabacum
Nitab4.5_0008958g0010 Nicotiana tabacum
Nitab4.5_0010222g0030 Nicotiana tabacum
Nn1g08912 Nelumbo nucifera
Nn3g21857 Nelumbo nucifera
Nn4g25536 Nelumbo nucifera
Nn6g35445 Nelumbo nucifera
Nn8g38896 Nelumbo nucifera
Nn8g39131 Nelumbo nucifera
Oeu006976.1 Olea europaea
Oeu034043.1 Olea europaea
Os01g0712700 Oryza sativa ssp. japonica
Os06g0611600 Oryza sativa ssp. japonica
Peaxi162Scf00354g00026 Petunia axillaris
Peaxi162Scf01318g00001 Petunia axillaris
PGR142G4167 Punica granatum
PGSC0003DMG400007756 Solanum tuberosum
Phvul.002G304000 Phaseolus vulgaris
Phvul.004G170900 Phaseolus vulgaris
Potri.006G150600 Populus trichocarpa
Potri.018G066400 Populus trichocarpa
Pp3c11_5250 Physcomitrium patens
Pp3c1_4510 Physcomitrium patens
Pp3c7_23670 Physcomitrium patens
PRCOL_00002089 Prasinoderma coloniale
Prupe.7G211600 Prunus persica
Psat1g050280 Pisum sativum
Psat7g020200 Pisum sativum
PSO063G1447 Papaver somniferum
PSO832G3392 Papaver somniferum
QL02p062866 Quercus lobata
RcHm_v2.0_Chr2g0093131 Rosa chinensis
RcHm_v2.0_Chr4g0396261 Rosa chinensis
Rhsim03G0233200 Rhododendron simsii
Sabra06G0119300 Salix brachista
Sabra18G0058900 Salix brachista
SabraUnG0005300 Salix brachista
SalBow6G4675 Salvia bowleyana
SalBow7G1851 Salvia bowleyana
Sc08g0008410 Simmondsia chinensis
Sed0000540 Sechium edule
Sed0008525 Sechium edule
SEGI_35809 Sequoiadendron giganteum
SGA_v2.0_scaffold62G21599 Striga asiatica
SGA_v2.0_scaffold64G21977 Striga asiatica
SMO367G0845 Selaginella moellendorffii
Solyc07g021750.1 Solanum lycopersicum
Sopen07g011620 Solanum pennellii
Sp3g32950 Schrenkiella parvula
Sp7g27420 Schrenkiella parvula
Sp7g27430 Schrenkiella parvula
TAR383G0148 Trochodendron aralioides
TAR626G1007 Trochodendron aralioides
THA.LOC104801882 Tarenaya hassleriana
THA.LOC104803976 Tarenaya hassleriana
Thecc.09G091100 Theobroma cacao
Thhalv10002058m.g Eutrema salsugineum
Thhalv10023108m.g Eutrema salsugineum
Thhalv10026995m.g Eutrema salsugineum
TPR.G25452 Trifolium pratense
TPR.G35502 Trifolium pratense
TWI32G1006 Tripterygium wilfordii
TWI34G0516 Tripterygium wilfordii
unitig_27.g24726 Utricularia gibba
vmacro06284 Vaccinium macrocarpon
VMungo0251G0329 Vigna mungo
VMungo0464G1479 Vigna mungo
Zm00001eb155060 Zea mays
Zm00001eb361370 Zea mays

User provided reference genes

Program Settings