Gene: AT2G19570

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G19570
  • Transcript Identifier AT2G19570.1
  • Gene Type Coding gene
  • Location Chr2 : 8470598-8471503 : negative

Gene Family Information

  • ID HOM05D003151
  • #Genes/#Species 217/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G19570.1
  • symbol CDA1
  • Alias AT-CDA1,DESZ
  • uniprot O65896

Descriptions

  • Description cytidine deaminase 1
  • Computational description cytidine deaminase 1 (CDA1); CONTAINS InterPro DOMAIN/s: Cytidine deaminase, homodimeric (InterPro:IPR006263), APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193), Cytidine/deoxycytidylate deaminase, zinc-binding domain (InterPro:IPR013171); BEST Arabidopsis thaliana protein match is: Cytidine/deoxycytidylate deaminase family protein (TAIR:AT4G29610.1); Has 2638 Blast hits to 2526 proteins in 1057 species: Archae - 42; Bacteria - 2022; Metazoa - 110; Fungi - 58; Plants - 130; Viruses - 0; Other Eukaryotes - 276 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009972
IEA
GOA Databasecytidine deamination
GO:0009972
IDA
IBA
Gene Ontologycytidine deamination1 2
GO:0009972
IEA
InterProcytidine deamination
GO:0006216
IMP
Gene Ontologycytidine catabolic process3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IDA
IBA
Gene Ontologyzinc ion binding1 2
GO:0008270
IEA
InterProzinc ion binding
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0004126
IEA
GOA Databasecytidine deaminase activity
GO:0004126
IDA
IBA
Gene Ontologycytidine deaminase activity1 2
GO:0004126
IEA
InterProcytidine deaminase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0047844
IEA
GOA Databasedeoxycytidine deaminase activity
GO:0047844
IDA
Gene Ontologydeoxycytidine deaminase activity3
GO:0042803
IPI
Gene Ontologyprotein homodimerization activity4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IDA
ISS, IBA
Gene Ontologycytosol1 2 3
GO:0005634
ISM
Gene Ontologynucleus
GO:0005739
HDA
Gene Ontologymitochondrion5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002125 Cytidine and deoxycytidylate deaminase domain
IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain
IPR016193 Cytidine deaminase-like
IPR006263 Cytidine deaminase, homodimeric
Mapman id Description
6.2.4.2 Nucleotide metabolism.pyrimidines.catabolism.cytidine deaminase