Gene: COL.COLO4_18213

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_18213
  • Transcript Identifier COL.rna16976
  • Gene Type Coding gene
  • Location AWUE01016436.1 : 19946-20854 : negative

Gene Family Information

  • ID HOM05D003151
  • #Genes/#Species 217/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna16976
  • GenBank OMO91609.1
  • id gene18185
  • gene_name COLO4_18213
  • uniprot A0A1R3J9V0

Descriptions

  • Description CMP/dCMP deaminase, zinc-binding protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009972
IEA
GOA Databasecytidine deamination
GO:0009972
IEA
InterProcytidine deamination
GO:0006216
ISO
PLAZA Integrative Orthologycytidine catabolic process AT2G19570

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0047844
IEA
GOA Databasedeoxycytidine deaminase activity
GO:0004126
IEA
GOA Databasecytidine deaminase activity
GO:0004126
IEA
InterProcytidine deaminase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT2G19570

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G19570

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002125 Cytidine and deoxycytidylate deaminase domain
IPR016193 Cytidine deaminase-like
IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain
IPR006263 Cytidine deaminase, homodimeric
Mapman id Description
6.2.4.2 Nucleotide metabolism.pyrimidines.catabolism.cytidine deaminase