Gene: AT4G29620

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G29620
  • Transcript Identifier AT4G29620.1
  • Gene Type Coding gene
  • Location Chr4 : 14519892-14520905 : positive

Gene Family Information

  • ID HOM05D003151
  • #Genes/#Species 217/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G29620.1
  • uniprot O65571

Descriptions

  • Description Cytidine/deoxycytidylate deaminase family protein
  • Computational description Cytidine/deoxycytidylate deaminase family protein; FUNCTIONS IN: hydrolase activity, cytidine deaminase activity, catalytic activity, zinc ion binding; INVOLVED IN: cytidine deamination, cytidine metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytidine deaminase, homodimeric (InterPro:IPR006263), APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193), Cytidine/deoxycytidylate deaminase, zinc-binding domain (InterPro:IPR013171); BEST Arabidopsis thaliana protein match is: Cytidine/deoxycytidylate deaminase family protein (TAIR:AT4G29600.1); Has 1708 Blast hits to 1703 proteins in 740 species: Archae - 42; Bacteria - 1328; Metazoa - 70; Fungi - 9; Plants - 128; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009972
IEA
GOA Databasecytidine deamination
GO:0009972
IBA
Gene Ontologycytidine deamination1
GO:0009972
IEA
InterProcytidine deamination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IBA
Gene Ontologyzinc ion binding1
GO:0008270
IEA
InterProzinc ion binding
GO:0004126
IEA
GOA Databasecytidine deaminase activity
GO:0004126
IBA
Gene Ontologycytidine deaminase activity1
GO:0004126
IEA
InterProcytidine deaminase activity
GO:0047844
IEA
GOA Databasedeoxycytidine deaminase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005829
IBA
Gene Ontologycytosol1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain
IPR002125 Cytidine and deoxycytidylate deaminase domain
IPR016193 Cytidine deaminase-like
IPR006263 Cytidine deaminase, homodimeric
Mapman id Description
6.2.4.2 Nucleotide metabolism.pyrimidines.catabolism.cytidine deaminase