Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p21250 Brassica napus
A07p18520 Brassica napus
A08p24230 Brassica napus
Aa31LG6G16760 Aethionema arabicum
Aa31LG6G16770 Aethionema arabicum
Aa31sc108G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.173 Anthoceros agrestis
Actinidia14045 Actinidia chinensis
Actinidia15499 Actinidia chinensis
Actinidia17048 Actinidia chinensis
Ah.00g000920 Amaranthus hybridus
Ah.00g000930 Amaranthus hybridus
Ah.01g023750 Amaranthus hybridus
AL1G51340 Arabidopsis lyrata
AL7G10220 Arabidopsis lyrata
Aqoxy6G01639 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.62GDRA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6K5E5I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7A0A2P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LDA3VX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RY1VLM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TAF7VU Arachis hypogaea
AT1G42470 Arabidopsis thaliana
AT4G38350 Arabidopsis thaliana
ATR0807G132 Amborella trichopoda
Atru.chr13.127 Acer truncatum
Atru.chr5.3545 Acer truncatum
AUR62011714 Chenopodium quinoa
AUR62012915 Chenopodium quinoa
AUR62036842 Chenopodium quinoa
AUR62040814 Chenopodium quinoa
BcaB01g00334 Brassica carinata
BcaB02g10131 Brassica carinata
BcaB06g28180 Brassica carinata
BcaC01g00220 Brassica carinata
BcaC02g08217 Brassica carinata
BcaC02g10930 Brassica carinata
BolC3t19960H Brassica oleracea
BolC4t23858H Brassica oleracea
BolC4t27244H Brassica oleracea
BraA04t17693Z Brassica rapa
BraA07t29566Z Brassica rapa
BraA08t34378Z Brassica rapa
C03p77090 Brassica napus
C04p23550 Brassica napus
CAN.G311.125 Capsicum annuum
CAN.G371.21 Capsicum annuum
CANSAT25G2553 Cannabis sativa
CANSAT25G3484 Cannabis sativa
CARHR292420 Cardamine hirsuta
CARHR292430 Cardamine hirsuta
CARHR294090 Cardamine hirsuta
Carub.0001s3427 Capsella rubella
Carub.0007s0024 Capsella rubella
Ca_06440_v3 Cicer arietinum L.
Ca_06501_v3 Cicer arietinum L.
Ca_15428_v3 Cicer arietinum L.
CBR_g70736 Chara braunii
Cc10_g00550 Coffea canephora
CDE06G1400 Ceratophyllum demersum
CDE06G1686 Ceratophyllum demersum
CDE06G2297 Ceratophyllum demersum
Cfa005358 Carpinus fangiana
Cfa014096 Carpinus fangiana
Cfa025027 Carpinus fangiana
Ciclev10000039m.g Citrus clementina
Ciclev10017739m.g Citrus clementina
Ciclev10030120m.g Citrus clementina
CiPaw.05G091900 Carya illinoinensis
CiPaw.05G092000 Carya illinoinensis
CiPaw.07G137500 Carya illinoinensis
CiPaw.08G074200 Carya illinoinensis
ClCG02G009900 Citrullus lanatus
ClCG02G009910 Citrullus lanatus
ClCG02G009920 Citrullus lanatus
ClCG02G009930 Citrullus lanatus
ClCG11G018740 Citrullus lanatus
COL.COLO4_17925 Corchorus olitorius
COL.COLO4_36399 Corchorus olitorius
COL.COLO4_36400 Corchorus olitorius
Cpa.g.sc20.208 Carica papaya
Cpa.g.sc20.209 Carica papaya
Cpa.g.sc20.213 Carica papaya
Cpa.g.sc20.214 Carica papaya
Cpa.g.sc26.185 Carica papaya
Cre02.g093500 Chlamydomonas reinhardtii
Cre12.g550900 Chlamydomonas reinhardtii
CsaV3_4G037280 Cucumis sativus L.
CsaV3_6G010220 Cucumis sativus L.
CsaV3_6G011220 Cucumis sativus L.
CSS0001711 Camellia sinensis var. sinensis
CSS0002623 Camellia sinensis var. sinensis
CSS0007243 Camellia sinensis var. sinensis
DCAR_006284 Daucus carota
DCAR_013926 Daucus carota
Dinv31954 Davidia involucrata
Dinv41875 Davidia involucrata
Duzib041G0747 Durio zibethinus
Duzib093G0382 Durio zibethinus
Duzib132G1131 Durio zibethinus
ECA238G2170 Erigeron canadensis
EL10Ac1g01939 Beta vulgaris
EL10Ac9g21241 Beta vulgaris
Eucgr.F01780 Eucalyptus grandis
Eucgr.I01521 Eucalyptus grandis
FAN04G1562 Fragaria x ananassa
FAN08G0043 Fragaria x ananassa
FAN15G2627 Fragaria x ananassa
FAN18G0314 Fragaria x ananassa
FAN24G2145 Fragaria x ananassa
FvH4_2g16650 Fragaria vesca
FvH4_5g25290 Fragaria vesca
Glyma.02G310900 Glycine max
Glyma.04G017300 Glycine max
Glyma.06G017700 Glycine max
Glyma.14G001500 Glycine max
Gohir.A01G104800 Gossypium hirsutum
Gohir.A01G175200 Gossypium hirsutum
Gohir.D01G090000 Gossypium hirsutum
Gohir.D01G166300 Gossypium hirsutum
Gorai.002G115700 Gossypium raimondii
Gorai.002G206800 Gossypium raimondii
GSVIVG01013373001 Vitis vinifera
GSVIVG01023884001 Vitis vinifera
HanXRQChr06g0184121 Helianthus annuus
HanXRQChr14g0427461 Helianthus annuus
Haze_01987 Corylus avellana
Haze_01988 Corylus avellana
Haze_02004 Corylus avellana
Haze_22802 Corylus avellana
Hma1.2p1_0271F.1_g108870 Hydrangea macrophylla
Hma1.2p1_1100F.1_g256940 Hydrangea macrophylla
Hma1.2p1_1100F.1_g256960 Hydrangea macrophylla
Hma1.2p1_2970F.1_g331060 Hydrangea macrophylla
Hma1.2p1_2970F.1_g331070 Hydrangea macrophylla
HPP92_001734 Vanilla planifolia
Hund05093 Selenicereus undatus
Hund05094 Selenicereus undatus
Hund06161 Selenicereus undatus
Hund06162 Selenicereus undatus
Lalb_Chr04g0246941 Lupinus albus
Lalb_Chr08g0246451 Lupinus albus
Lalb_Chr08g0246461 Lupinus albus
Lalb_Chr11g0061571 Lupinus albus
Lalb_Chr11g0061581 Lupinus albus
Lalb_Chr23g0265741 Lupinus albus
Lj1g0023322 Lotus japonicus
Lj4C806T13 Lonicera japonica
Lj5A172G81 Lonicera japonica
LjContig00081g0019328 Lotus japonicus
Lsat_1_v5_gn_2_4580 Lactuca sativa
Manes.05G130900 Manihot esculenta
Manes.11G110701 Manihot esculenta
Manes.18G004200 Manihot esculenta
Mapoly0038s0034 Marchantia polymorpha
MCO08G003 Micromonas commoda
MD06G1009400 Malus domestica
MD10G1139800 Malus domestica
MD16G1285100 Malus domestica
MD16G1285200 Malus domestica
MD16G1285400 Malus domestica
Medtr3g115450 Medicago truncatula
Medtr5g099070 Medicago truncatula
MELO3C013507.2 Cucumis melo
MELO3C017027.2 Cucumis melo
Migut.C00393 Erythranthe guttata
MSTRG.24928 Avicennia marina
Nitab4.5_0000339g0160 Nicotiana tabacum
Nitab4.5_0001929g0020 Nicotiana tabacum
Nitab4.5_0004470g0030 Nicotiana tabacum
Nn5g30968 Nelumbo nucifera
Nn6g31715 Nelumbo nucifera
Oeu000697.1 Olea europaea
Oeu026509.1 Olea europaea
Oeu028340.1 Olea europaea
Oeu052983.1 Olea europaea
Os04g0563801 Oryza sativa ssp. japonica
Peaxi162Scf00711g00211 Petunia axillaris
PGR083G1740 Punica granatum
PGR142G4088 Punica granatum
PGSC0003DMG400009984 Solanum tuberosum
Phvul.008G126037 Phaseolus vulgaris
Phvul.008G291900 Phaseolus vulgaris
Phvul.009G011300 Phaseolus vulgaris
Potri.002G009600 Populus trichocarpa
Potri.005G251800 Populus trichocarpa
Potri.009G167000 Populus trichocarpa
Pp3c2_3460 Physcomitrium patens
Pp3c3_37390 Physcomitrium patens
PRCOL_00000924 Prasinoderma coloniale
PRCOL_00005837 Prasinoderma coloniale
PRCOL_00007044 Prasinoderma coloniale
Prupe.5G011100 Prunus persica
Prupe.8G178600 Prunus persica
Psat0ss3186g0160 Pisum sativum
Psat2g001080 Pisum sativum
Psat5g010080 Pisum sativum
Psat7g093640 Pisum sativum
PSO541G5974 Papaver somniferum
PSO675G3157 Papaver somniferum
QL02p014478 Quercus lobata
QL11p055968 Quercus lobata
RcHm_v2.0_Chr6g0280781 Rosa chinensis
RcHm_v2.0_Chr6g0280801 Rosa chinensis
RcHm_v2.0_Chr6g0284841 Rosa chinensis
RcHm_v2.0_Chr7g0215501 Rosa chinensis
Rhsim06G0006500 Rhododendron simsii
Rhsim11G0197500 Rhododendron simsii
Sabra02G0007000 Salix brachista
Sabra05G0195100 Salix brachista
Sabra09G0130100 Salix brachista
SalBow7G2064 Salvia bowleyana
Sc08g0002290 Simmondsia chinensis
Sc15g0004390 Simmondsia chinensis
Sed0019066 Sechium edule
Sed0023022 Sechium edule
SEGI_00015 Sequoiadendron giganteum
SEGI_01912 Sequoiadendron giganteum
SEGI_06566 Sequoiadendron giganteum
SEGI_14528 Sequoiadendron giganteum
SEGI_19560 Sequoiadendron giganteum
SGA_v2.0_scaffold319G48542 Striga asiatica
SGA_v2.0_scaffold587G53060 Striga asiatica
SHI07982 Sapria himalayana
SHI07983 Sapria himalayana
SHI07984 Sapria himalayana
SHI07986 Sapria himalayana
SHI07989 Sapria himalayana
SMO172G0174 Selaginella moellendorffii
Solyc04g082490.3 Solanum lycopersicum
Sopen04g036110 Solanum pennellii
Sp4g10810 Schrenkiella parvula
Sp7g37420 Schrenkiella parvula
TAR381G0938 Trochodendron aralioides
TAR628G0472 Trochodendron aralioides
THA.LOC104801956 Tarenaya hassleriana
THA.LOC104812975 Tarenaya hassleriana
THA.LOC104813176 Tarenaya hassleriana
THA.LOC104824737 Tarenaya hassleriana
THA.LOC104824944 Tarenaya hassleriana
Thecc.02G044300 Theobroma cacao
Thecc.08G060400 Theobroma cacao
Thhalv10016155m.g Eutrema salsugineum
Thhalv10024233m.g Eutrema salsugineum
TPR.G18634 Trifolium pratense
TPR.G38096 Trifolium pratense
TWI31G1441 Tripterygium wilfordii
TWI56G0100 Tripterygium wilfordii
unitig_747.g21540 Utricularia gibba
vmacro02333 Vaccinium macrocarpon
vmacro02335 Vaccinium macrocarpon
vmacro02336 Vaccinium macrocarpon
vmacro21805 Vaccinium macrocarpon
VMungo0464G1685 Vigna mungo
VMungo0647G1134 Vigna mungo
VMungo1080G0342 Vigna mungo
VMungo1215G1648 Vigna mungo
VMungo1309G1773 Vigna mungo
VMungo1309G2497 Vigna mungo
Zm00001eb429140 Zea mays
Zm00001eb439270 Zea mays
Zm00001eb439290 Zea mays

User provided reference genes

Program Settings