Gene: Sopen04g036110

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g036110
  • Transcript Identifier Sopen04g036110.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 76842230-76858378 : negative

Gene Family Information

  • ID HOM05D000564
  • #Genes/#Species 981/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g036110.1

Descriptions

  • Description Patched family protein | FUNCTIONS IN: hedgehog receptor activity | LOCATED IN: membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Niemann-Pick C type protein , Patched , Sterol-sensing 5TM box | BEST Arabidopsis thaliana protein match is: Patched family protein ., Patched
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090153
ISO
PLAZA Integrative Orthologyregulation of sphingolipid biosynthetic process AT4G38350
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT1G42470
GO:0048868
ISO
PLAZA Integrative Orthologypollen tube development AT4G38350

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005319
IEA
InterProlipid transporter activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
InterProintegral component of membrane
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G42470
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT4G38350
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT4G38350
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G42470

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032190 Niemann-Pick C1, N-terminal
IPR004765 NPC1-like
IPR003392 Protein patched/dispatched
Mapman id Description
35.1 not assigned.annotated