Gene: FvH4_5g25290

General Information

Structural Information

  • Species Fragaria vesca
  • Gene Identifier FvH4_5g25290
  • Transcript Identifier FvH4_5g25290.t6
  • Gene Type Coding gene
  • Location Fvb5 : 16767630-16782297 : negative

Gene Family Information

  • ID HOM05D000564
  • #Genes/#Species 981/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id FvH4_5g25290.v4.0.a2
  • pacid 50699766

Descriptions

  • Description K12385 - Niemann-Pick C1 protein (NPC1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090153
ISO
PLAZA Integrative Orthologyregulation of sphingolipid biosynthetic process AT4G38350
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT1G42470
GO:0048868
ISO
PLAZA Integrative Orthologypollen tube development AT4G38350

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005319
IEA
InterProlipid transporter activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
InterProintegral component of membrane
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G42470
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT4G38350
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT4G38350
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G42470

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032190 Niemann-Pick C1, N-terminal
IPR003392 Protein patched/dispatched
IPR004765 NPC1-like
Mapman id Description
35.1 not assigned.annotated