Gene: Cre12.g550900

General Information

Structural Information

  • Species Chlamydomonas reinhardtii
  • Gene Identifier Cre12.g550900
  • Transcript Identifier Cre12.g550900.t1.2
  • Gene Type Coding gene
  • Location chromosome_12 : 8168294-8181589 : positive

Gene Family Information

  • ID HOM05D000564
  • #Genes/#Species 981/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Cre12.g550900.v5.5
  • pacid 30793459
  • alias g13527.t1
  • geneName SSD3
  • uniprot A8IYI0

Descriptions

  • Description Sterol sensing domain protein similar to Arabidopsis protein and similar to Niemann-Pick disease protein
  • Description Sterol sensing domain protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090153
ISO
PLAZA Integrative Orthologyregulation of sphingolipid biosynthetic process AT4G38350
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT1G42470
GO:0048868
ISO
PLAZA Integrative Orthologypollen tube development AT4G38350

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
InterProintegral component of membrane
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G42470
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT4G38350
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT4G38350
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G42470

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003392 Protein patched/dispatched
IPR032190 Niemann-Pick C1, N-terminal
IPR000731 Sterol-sensing domain
Mapman id Description
35.1 not assigned.annotated