Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p17170 Brassica napus
A02p31870 Brassica napus
A06p44510 Brassica napus
Aa31LG1G90 Aethionema arabicum
Aa31LG2G8620 Aethionema arabicum
Aa31LG4G9970 Aethionema arabicum
Aa31LG5G15190 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4077 Anthoceros agrestis
Actinidia05772 Actinidia chinensis
Actinidia15245 Actinidia chinensis
Actinidia30936 Actinidia chinensis
Actinidia36687 Actinidia chinensis
Ah.06g189080 Amaranthus hybridus
Ah.06g192220 Amaranthus hybridus
AL2G30680 Arabidopsis lyrata
AL3G14950 Arabidopsis lyrata
AL5G10250 Arabidopsis lyrata
Aqoxy2G03452 Aquilegia oxysepala
Aqoxy3G03977 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6RWY33 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6YEN7W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D99XSD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IMCF17 Arachis hypogaea
AT1G71100 Arabidopsis thaliana
AT2G01290 Arabidopsis thaliana
AT3G04790 Arabidopsis thaliana
ATR0326G046 Amborella trichopoda
ATR0665G255 Amborella trichopoda
ATR0763G220 Amborella trichopoda
Atru.chr11.382 Acer truncatum
Atru.chr2.797 Acer truncatum
AUR62000706 Chenopodium quinoa
AUR62001026 Chenopodium quinoa
AUR62004926 Chenopodium quinoa
AUR62005257 Chenopodium quinoa
BcaB04g21346 Brassica carinata
BcaB05g24644 Brassica carinata
BcaB07g30410 Brassica carinata
BcaC03g15267 Brassica carinata
BcaC03g17020 Brassica carinata
BcaC06g31319 Brassica carinata
BcaC06g31322 Brassica carinata
BcaC06g34198 Brassica carinata
BcaC06g34203 Brassica carinata
BcaNung06423 Brassica carinata
BcaNung06425 Brassica carinata
BolC2t08905H Brassica oleracea
BolC2t11018H Brassica oleracea
BolC5t34903H Brassica oleracea
BolC7t43711H Brassica oleracea
BraA01t04504Z Brassica rapa
BraA02t06763Z Brassica rapa
BraA02t08196Z Brassica rapa
BraA05t22975Z Brassica rapa
BraA06t27325Z Brassica rapa
C02p28610 Brassica napus
C02p49310 Brassica napus
C07p31720 Brassica napus
CAN.G134.110 Capsicum annuum
CAN.G1693.12 Capsicum annuum
CAN.G359.9 Capsicum annuum
CAN.G99.4 Capsicum annuum
CANSAT01G0158 Cannabis sativa
CANSAT01G1020 Cannabis sativa
CANSAT54G2431 Cannabis sativa
CARHR064390 Cardamine hirsuta
CARHR079040 Cardamine hirsuta
CARHR143820 Cardamine hirsuta
Carub.0002s1792 Capsella rubella
Carub.0003s0396 Capsella rubella
Carub.0005s0027 Capsella rubella
Ca_09414_v3 Cicer arietinum L.
Ca_11097_v3 Cicer arietinum L.
CBR_g28662 Chara braunii
CBR_g39237 Chara braunii
CBR_g50124 Chara braunii
Cc01_g03210 Coffea canephora
Cc11_g08950 Coffea canephora
CDE04G0264 Ceratophyllum demersum
CDE07G1771 Ceratophyllum demersum
CDE10G0303 Ceratophyllum demersum
CDE10G0370 Ceratophyllum demersum
Cfa006447 Carpinus fangiana
Cfa008579 Carpinus fangiana
Ciclev10002135m.g Citrus clementina
Ciclev10010606m.g Citrus clementina
Ciclev10016309m.g Citrus clementina
CiPaw.05G247800 Carya illinoinensis
CiPaw.06G013500 Carya illinoinensis
CiPaw.07G065400 Carya illinoinensis
ClCG01G006170 Citrullus lanatus
ClCG02G016530 Citrullus lanatus
ClCG05G022210 Citrullus lanatus
COL.COLO4_15308 Corchorus olitorius
COL.COLO4_20452 Corchorus olitorius
COL.COLO4_35738 Corchorus olitorius
Cpa.g.sc117.78 Carica papaya
Cpa.g.sc65.113 Carica papaya
Cre03.g187450 Chlamydomonas reinhardtii
CsaV3_2G004240 Cucumis sativus L.
CsaV3_5G028490 Cucumis sativus L.
CsaV3_5G034910 Cucumis sativus L.
CSS0000531 Camellia sinensis var. sinensis
CSS0007044 Camellia sinensis var. sinensis
CSS0021335 Camellia sinensis var. sinensis
CSS0024772 Camellia sinensis var. sinensis
DCAR_007280 Daucus carota
DCAR_011702 Daucus carota
DCAR_026764 Daucus carota
Dinv04803 Davidia involucrata
Dinv05146 Davidia involucrata
Dinv05368 Davidia involucrata
Dinv05888 Davidia involucrata
Dinv16199 Davidia involucrata
Duzib106G1319 Durio zibethinus
Duzib177G0313 Durio zibethinus
Duzib248G0506 Durio zibethinus
Duzib251G0712 Durio zibethinus
Duzib268G0091 Durio zibethinus
ECA232G0896 Erigeron canadensis
ECA232G3192 Erigeron canadensis
ECA233G2989 Erigeron canadensis
ECA233G3687 Erigeron canadensis
ECA247G3420 Erigeron canadensis
EL10Ac4g09113 Beta vulgaris
EL10Ac4g09844 Beta vulgaris
Eucgr.B02112 Eucalyptus grandis
Eucgr.G02204 Eucalyptus grandis
Eucgr.H04380 Eucalyptus grandis
Eucgr.L03383 Eucalyptus grandis
FAN02G4386 Fragaria x ananassa
FAN05G3118 Fragaria x ananassa
FAN05G5636 Fragaria x ananassa
FAN07G2528 Fragaria x ananassa
FAN09G2166 Fragaria x ananassa
FAN14G1011 Fragaria x ananassa
FAN19G1625 Fragaria x ananassa
FAN22G0149 Fragaria x ananassa
FAN23G2297 Fragaria x ananassa
FAN26G3398 Fragaria x ananassa
FAN28G2053 Fragaria x ananassa
FvH4_1g20420 Fragaria vesca
FvH4_4g32160 Fragaria vesca
FvH4_6g03160 Fragaria vesca
Glyma.03G246300 Glycine max
Glyma.10G265400 Glycine max
Glyma.19G243800 Glycine max
Glyma.20G125200 Glycine max
Gohir.A01G153700 Gossypium hirsutum
Gohir.A03G123200 Gossypium hirsutum
Gohir.A08G214500 Gossypium hirsutum
Gohir.A11G253800 Gossypium hirsutum
Gohir.A12G150100 Gossypium hirsutum
Gohir.D01G100100 Gossypium hirsutum
Gohir.D02G145800 Gossypium hirsutum
Gohir.D08G231700 Gossypium hirsutum
Gohir.D11G263700 Gossypium hirsutum
Gohir.D12G153700 Gossypium hirsutum
Gorai.002G181100 Gossypium raimondii
Gorai.004G246100 Gossypium raimondii
Gorai.005G163200 Gossypium raimondii
Gorai.007G283700 Gossypium raimondii
Gorai.008G166200 Gossypium raimondii
GSVIVG01025127001 Vitis vinifera
HanXRQChr08g0212591 Helianthus annuus
HanXRQChr12g0366161 Helianthus annuus
HanXRQChr15g0477321 Helianthus annuus
HanXRQChr15g0488591 Helianthus annuus
Haze_04346 Corylus avellana
Haze_11034 Corylus avellana
Hma1.2p1_0079F.1_g041120 Hydrangea macrophylla
Hma1.2p1_0079F.1_g041140 Hydrangea macrophylla
Hma1.2p1_0114F.1_g055180 Hydrangea macrophylla
HPP92_001009 Vanilla planifolia
HPP92_017648 Vanilla planifolia
HPP92_027368 Vanilla planifolia
Hund06960 Selenicereus undatus
Lalb_Chr02g0145531 Lupinus albus
Lalb_Chr06g0165631 Lupinus albus
Lalb_Chr15g0076831 Lupinus albus
Lalb_Chr21g0308501 Lupinus albus
Lj1g0018965 Lotus japonicus
Lj3P875T18 Lonicera japonica
Lj5g0026699 Lotus japonicus
Lj6P749T27 Lonicera japonica
Lj7A580T62 Lonicera japonica
Lsat_1_v5_gn_3_54301 Lactuca sativa
Lsat_1_v5_gn_8_34821 Lactuca sativa
Lsat_1_v5_gn_8_43001 Lactuca sativa
Manes.02G135000 Manihot esculenta
Manes.06G061700 Manihot esculenta
Manes.08G132900 Manihot esculenta
Manes.09G154000 Manihot esculenta
Manes.14G135500 Manihot esculenta
Mapoly0213s0005 Marchantia polymorpha
MBI05_g12590_MAGBIO Magnolia biondii
MCO09G104 Micromonas commoda
MD04G1222500 Malus domestica
MD12G1238600 Malus domestica
MD13G1028000 Malus domestica
Medtr1g108440 Medicago truncatula
Medtr7g114900 Medicago truncatula
MELO3C004370.2 Cucumis melo
MELO3C005310.2 Cucumis melo
MELO3C012301.2 Cucumis melo
Migut.E00408 Erythranthe guttata
Migut.L00759 Erythranthe guttata
Migut.N03150 Erythranthe guttata
MSTRG.13572 Avicennia marina
MSTRG.2189 Avicennia marina
Nitab4.5_0000414g0100 Nicotiana tabacum
Nitab4.5_0004469g0070 Nicotiana tabacum
Nitab4.5_0005582g0010 Nicotiana tabacum
Nitab4.5_0006134g0010 Nicotiana tabacum
Nitab4.5_0007384g0010 Nicotiana tabacum
Nitab4.5_0012569g0010 Nicotiana tabacum
Nn1g02426 Nelumbo nucifera
Nn4g24066 Nelumbo nucifera
Oeu002659.5 Olea europaea
Oeu027463.2 Olea europaea
Oeu044335.1 Olea europaea
Os04g0306400 Oryza sativa ssp. japonica
Os07g0176900 Oryza sativa ssp. japonica
Peaxi162Scf00119g00159 Petunia axillaris
Peaxi162Scf00205g00053 Petunia axillaris
Peaxi162Scf00282g00110 Petunia axillaris
PGR004G1834 Punica granatum
PGR119G2516 Punica granatum
PGSC0003DMG400005961 Solanum tuberosum
PGSC0003DMG400019448 Solanum tuberosum
PGSC0003DMG400030509 Solanum tuberosum
Phvul.002G234600 Phaseolus vulgaris
Phvul.006G100600 Phaseolus vulgaris
Phvul.007G036500 Phaseolus vulgaris
Potri.001G225700 Populus trichocarpa
Potri.005G052000 Populus trichocarpa
Potri.008G127600 Populus trichocarpa
Potri.010G115300 Populus trichocarpa
Potri.013G039400 Populus trichocarpa
Pp3c16_10280 Physcomitrium patens
Pp3c5_21490 Physcomitrium patens
PRCOL_00001287 Prasinoderma coloniale
Prupe.1G322200 Prunus persica
Prupe.6G341500 Prunus persica
Psat6g221800 Pisum sativum
Psat7g065880 Pisum sativum
PSO063G5077 Papaver somniferum
PSO063G6007 Papaver somniferum
PSO135G0182 Papaver somniferum
PSO170G1495 Papaver somniferum
PSO210G0480 Papaver somniferum
PSO210G3086 Papaver somniferum
PSO210G3630 Papaver somniferum
PSO210G7272 Papaver somniferum
PSO591G0484 Papaver somniferum
PSO724G0982 Papaver somniferum
PSO832G2935 Papaver somniferum
PSO832G3483 Papaver somniferum
QL01p002250 Quercus lobata
QL03p025013 Quercus lobata
RcHm_v2.0_Chr2g0112671 Rosa chinensis
RcHm_v2.0_Chr3g0451421 Rosa chinensis
RcHm_v2.0_Chr4g0440871 Rosa chinensis
Rhsim05G0161100 Rhododendron simsii
Rhsim09G0100800 Rhododendron simsii
Sabra05G0045700 Salix brachista
Sabra08G0096400 Salix brachista
Sabra10G0085300 Salix brachista
Sabra13G0036800 Salix brachista
Sabra16G0134200 Salix brachista
SalBow8G0372 Salvia bowleyana
SalBow8G1349 Salvia bowleyana
SalBow8G3903 Salvia bowleyana
Sc04g0005710 Simmondsia chinensis
Sc06g0003720 Simmondsia chinensis
Sc14g0007200 Simmondsia chinensis
Sed0002304 Sechium edule
Sed0009091 Sechium edule
Sed0015594 Sechium edule
Sed0021286 Sechium edule
SEGI_08408 Sequoiadendron giganteum
SGA_v2.0_scaffold12G05982 Striga asiatica
SGA_v2.0_scaffold14G06933 Striga asiatica
SGA_v2.0_scaffold170G38827 Striga asiatica
SGA_v2.0_scaffold38G15056 Striga asiatica
SHI04808 Sapria himalayana
SHI18377 Sapria himalayana
SMO367G0722 Selaginella moellendorffii
Solyc01g097460.3 Solanum lycopersicum
Solyc05g008370.2 Solanum lycopersicum
Sopen01g041130 Solanum pennellii
Sopen04g017870 Solanum pennellii
Sopen05g004200 Solanum pennellii
Sp2g12750 Schrenkiella parvula
Sp3g03630 Schrenkiella parvula
Sp5g26270 Schrenkiella parvula
TAR362G1204 Trochodendron aralioides
TAR369G0116 Trochodendron aralioides
TAR636G0103 Trochodendron aralioides
TAR636G3567 Trochodendron aralioides
THA.LOC104805059 Tarenaya hassleriana
THA.LOC104818637 Tarenaya hassleriana
THA.LOC104823893 Tarenaya hassleriana
THA.LOC104824150 Tarenaya hassleriana
Thecc.02G278500 Theobroma cacao
Thecc.05G286600 Theobroma cacao
Thhalv10000998m.g Eutrema salsugineum
Thhalv10004764m.g Eutrema salsugineum
Thhalv10019520m.g Eutrema salsugineum
Thhalv10021298m.g Eutrema salsugineum
TPR.G4877 Trifolium pratense
TPR.G6999 Trifolium pratense
TWI12G0936 Tripterygium wilfordii
TWI12G1397 Tripterygium wilfordii
TWI31G1267 Tripterygium wilfordii
TWI75G1662 Tripterygium wilfordii
TWI79G1561 Tripterygium wilfordii
unitig_27.g25175 Utricularia gibba
unitig_29.g31874 Utricularia gibba
unitig_37.g12635 Utricularia gibba
unitig_699.g19473 Utricularia gibba
unitig_699.g19474 Utricularia gibba
unitig_699.g19530 Utricularia gibba
vmacro18971 Vaccinium macrocarpon
VMungo0251G0682 Vigna mungo
VMungo0251G1885 Vigna mungo
VMungo0540G0098 Vigna mungo
VMungo0720G2529 Vigna mungo
Zm00001eb301210 Zea mays

User provided reference genes

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