Gene: MSTRG.13572
General Information
Structural Information
- Species Avicennia marina
- Gene Identifier MSTRG.13572
- Transcript Identifier MSTRG.13572.1
- Gene Type Coding gene
- Location ScioBoG_18778_HRSCAF_18863 : 2862196-2862627 : negative
Gene Family Information
- ID HOM05D001299
- #Genes/#Species 484/100
- Phylogenetic origin
- ID ORTHO05D001985
- #Genes/#Species 329/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
Descriptions
- tid MSTRG.13572.1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009052 | IEA | InterPro | pentose-phosphate shunt, non-oxidative branch | |
GO:0008219 | ISO | PLAZA Integrative Orthology | cell death | AT2G01290 |
GO:0010228 | ISO | PLAZA Integrative Orthology | vegetative to reproductive phase transition of meristem | AT2G01290 |
GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT3G04790 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0004751 | IEA | InterPro | ribose-5-phosphate isomerase activity |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT3G04790 |
GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G04790 |
GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT2G01290 |
GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT3G04790 |
GO:0009535 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid membrane | AT3G04790 |
GO:0009579 | ISO | PLAZA Integrative Orthology | thylakoid | AT3G04790 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR004788 | Ribose 5-phosphate isomerase, type A |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |