Gene: AT1G71100

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G71100
  • Transcript Identifier AT1G71100.1
  • Gene Type Coding gene
  • Location Chr1 : 26814726-26815529 : positive

Gene Family Information

  • ID HOM05D001299
  • #Genes/#Species 484/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G71100.1
  • symbol RSW10
  • full_name RADIAL SWELLING 10
  • uniprot Q9C998

Descriptions

  • Description Ribose 5-phosphate isomerase, type A protein
  • Computational description RADIAL SWELLING 10 (RSW10); FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: uridine biosynthetic process, response to karrikin, cellulose biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: ribose-5-phosphate isomerase 2 (TAIR:AT2G01290.1); Has 5045 Blast hits to 5045 proteins in 1956 species: Archae - 235; Bacteria - 3584; Metazoa - 111; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 829 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009052
IEA
Gene Ontologypentose-phosphate shunt, non-oxidative branch
GO:0009052
IEA
InterPropentose-phosphate shunt, non-oxidative branch
GO:0030244
IMP
Gene Ontologycellulose biosynthetic process1
GO:0046109
IMP
Gene Ontologyuridine biosynthetic process1
GO:0006098
IEA
GOA Databasepentose-phosphate shunt
GO:0080167
IEP
GOA Databaseresponse to karrikin

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004751
IEA
Gene Ontologyribose-5-phosphate isomerase activity
GO:0004751
IEA
InterProribose-5-phosphate isomerase activity
GO:0016853
IEA
GOA Databaseisomerase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IDA
Gene Ontologycytoplasm1
GO:0005829
IDA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004788 Ribose 5-phosphate isomerase, type A
IPR037171 NagB/RpiA transferase-like
Mapman id Description
3.9.2.1 Carbohydrate metabolism.oxidative pentose phosphate pathway.non-oxidative phase.ribose 5-phosphate isomerase