Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p25050 Brassica napus
A02p40860 Brassica napus
A06p18840 Brassica napus
A06p34630 Brassica napus
A09p06790 Brassica napus
Aa31LG11G3100 Aethionema arabicum
Aa31LG4G17440 Aethionema arabicum
Aa31LG8G11580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4117 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.794 Anthoceros agrestis
Actinidia04239 Actinidia chinensis
Actinidia13214 Actinidia chinensis
Actinidia21917 Actinidia chinensis
Actinidia22316 Actinidia chinensis
Actinidia22319 Actinidia chinensis
AL4G14210 Arabidopsis lyrata
AL5G28440 Arabidopsis lyrata
AL6G35020 Arabidopsis lyrata
AL7G21330 Arabidopsis lyrata
Aqoxy2G01784 Aquilegia oxysepala
Aqoxy3G03624 Aquilegia oxysepala
Aqoxy6G01524 Aquilegia oxysepala
Aqoxy7G03555 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0M27V0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FD6BI2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GQ20W9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y2JGKW Arachis hypogaea
AT3G48930 Arabidopsis thaliana
AT4G30800 Arabidopsis thaliana
AT5G23740 Arabidopsis thaliana
ATR0767G169 Amborella trichopoda
ATR0800G082 Amborella trichopoda
Atru.chr7.2490 Acer truncatum
Atru.chr7.269 Acer truncatum
AUR62011245 Chenopodium quinoa
AUR62011246 Chenopodium quinoa
AUR62012439 Chenopodium quinoa
AUR62022302 Chenopodium quinoa
AUR62031563 Chenopodium quinoa
AUR62036617 Chenopodium quinoa
AUR62041063 Chenopodium quinoa
AUR62041458 Chenopodium quinoa
BcaB01g00767 Brassica carinata
BcaB02g09571 Brassica carinata
BcaB04g19849 Brassica carinata
BcaB05g22974 Brassica carinata
BcaB07g29889 Brassica carinata
BcaC03g14440 Brassica carinata
BcaC03g18025 Brassica carinata
BcaC07g39366 Brassica carinata
BcaC08g46666 Brassica carinata
BcaC09g49918 Brassica carinata
BolC1t03067H Brassica oleracea
BolC2t07994H Brassica oleracea
BolC2t12128H Brassica oleracea
BolC3t18846H Brassica oleracea
BolC4t22512H Brassica oleracea
BolC6t36854H Brassica oleracea
BolC7t44914H Brassica oleracea
BolC8t50015H Brassica oleracea
BolC9t53669H Brassica oleracea
BraA01t02416Z Brassica rapa
BraA02t09031Z Brassica rapa
BraA06t24967Z Brassica rapa
BraA09t36325Z Brassica rapa
C01p31310 Brassica napus
C02p18540 Brassica napus
C02p60760 Brassica napus
C03p65880 Brassica napus
C04p09290 Brassica napus
C06p16510 Brassica napus
C07p43860 Brassica napus
C08p23880 Brassica napus
C09p07530 Brassica napus
CAN.G2071.6 Capsicum annuum
CAN.G311.5 Capsicum annuum
CAN.G492.70 Capsicum annuum
CANSAT11G0714 Cannabis sativa
CANSAT35G1698 Cannabis sativa
CARHR118230 Cardamine hirsuta
CARHR157730 Cardamine hirsuta
CARHR189790 Cardamine hirsuta
CARHR238640 Cardamine hirsuta
Carub.0004s0329 Capsella rubella
Carub.0005s1511 Capsella rubella
Carub.0006s2149 Capsella rubella
Carub.0007s0982 Capsella rubella
Ca_07694_v3 Cicer arietinum L.
Ca_21621_v3 Cicer arietinum L.
CBR_g16041 Chara braunii
Cc08_g00270 Coffea canephora
CDE02G0516 Ceratophyllum demersum
CDE02G3523 Ceratophyllum demersum
CDE05G2035 Ceratophyllum demersum
Cfa013109 Carpinus fangiana
Ciclev10009763m.g Citrus clementina
CiPaw.07G226600 Carya illinoinensis
CiPaw.08G008700 Carya illinoinensis
CiPaw.15G183200 Carya illinoinensis
ClCG02G003370 Citrullus lanatus
ClCG08G013490 Citrullus lanatus
COL.COLO4_12356 Corchorus olitorius
COL.COLO4_33796 Corchorus olitorius
Cpa.g.sc187.18 Carica papaya
Cpa.g.sc46.80 Carica papaya
Cre12.g514500 Chlamydomonas reinhardtii
CsaV3_2G032240 Cucumis sativus L.
CsaV3_7G001960 Cucumis sativus L.
CSS0010173 Camellia sinensis var. sinensis
CSS0012187 Camellia sinensis var. sinensis
CSS0019670 Camellia sinensis var. sinensis
CSS0023553 Camellia sinensis var. sinensis
CSS0026730 Camellia sinensis var. sinensis
CSS0029514 Camellia sinensis var. sinensis
CSS0033335 Camellia sinensis var. sinensis
CSS0035432 Camellia sinensis var. sinensis
CSS0038086 Camellia sinensis var. sinensis
CSS0040591 Camellia sinensis var. sinensis
CSS0043369 Camellia sinensis var. sinensis
CSS0049242 Camellia sinensis var. sinensis
DCAR_003011 Daucus carota
DCAR_006202 Daucus carota
Dinv15886 Davidia involucrata
Dinv18180 Davidia involucrata
Dinv41430 Davidia involucrata
Duzib133G1229 Durio zibethinus
Duzib138G0983 Durio zibethinus
Duzib150G1685 Durio zibethinus
Duzib168G2231 Durio zibethinus
Duzib187G1687 Durio zibethinus
ECA234G2784 Erigeron canadensis
ECA240G4314 Erigeron canadensis
EL10Ac2g04161 Beta vulgaris
EL10Ac8g18807 Beta vulgaris
Eucgr.C02730 Eucalyptus grandis
Eucgr.J00035 Eucalyptus grandis
FAN15G0342 Fragaria x ananassa
FAN19G0710 Fragaria x ananassa
FAN20G2743 Fragaria x ananassa
FAN23G0653 Fragaria x ananassa
FAN24G0173 Fragaria x ananassa
FAN26G0662 Fragaria x ananassa
FAN27G0747 Fragaria x ananassa
FAN28G0708 Fragaria x ananassa
FAN28G2198 Fragaria x ananassa
FvH4_1g01810 Fragaria vesca
FvH4_1g30360 Fragaria vesca
FvH4_2g28364 Fragaria vesca
Glyma.01G104900 Glycine max
Glyma.09G094200 Glycine max
Glyma.09G094300 Glycine max
Glyma.13G165200 Glycine max
Glyma.17G105900 Glycine max
Gohir.A06G050800 Gossypium hirsutum
Gohir.A08G056300 Gossypium hirsutum
Gohir.A08G092200 Gossypium hirsutum
Gohir.A08G237600 Gossypium hirsutum
Gohir.A13G203000 Gossypium hirsutum
Gohir.D01G098525 Gossypium hirsutum
Gohir.D06G049900 Gossypium hirsutum
Gohir.D08G065700 Gossypium hirsutum
Gohir.D08G102500 Gossypium hirsutum
Gohir.D08G258100 Gossypium hirsutum
Gohir.D13G208300 Gossypium hirsutum
Gorai.004G068000 Gossypium raimondii
Gorai.004G110600 Gossypium raimondii
Gorai.004G275200 Gossypium raimondii
Gorai.010G056800 Gossypium raimondii
Gorai.013G237400 Gossypium raimondii
GSVIVG01012877001 Vitis vinifera
GSVIVG01035927001 Vitis vinifera
HanXRQChr03g0061961 Helianthus annuus
HanXRQChr03g0091081 Helianthus annuus
HanXRQChr05g0137591 Helianthus annuus
HanXRQChr10g0297731 Helianthus annuus
HanXRQChr10g0303321 Helianthus annuus
HanXRQChr13g0420181 Helianthus annuus
HanXRQChr14g0429901 Helianthus annuus
Haze_19329 Corylus avellana
Haze_21467 Corylus avellana
Hma1.2p1_0182F.1_g080390 Hydrangea macrophylla
Hma1.2p1_0228F.1_g096520 Hydrangea macrophylla
HPP92_003783 Vanilla planifolia
HPP92_003858 Vanilla planifolia
Hund04450 Selenicereus undatus
Hund21603 Selenicereus undatus
Lalb_Chr07g0179461 Lupinus albus
Lalb_Chr08g0233641 Lupinus albus
Lalb_Chr11g0072991 Lupinus albus
Lalb_Chr12g0198481 Lupinus albus
Lalb_Chr13g0301241 Lupinus albus
Lj4g0027763 Lotus japonicus
Lj7A728G59 Lonicera japonica
Lj8A731G40 Lonicera japonica
Lj9C706T6 Lonicera japonica
Lsat_1_v5_gn_3_114740 Lactuca sativa
Lsat_1_v5_gn_5_110420 Lactuca sativa
Manes.03G012300 Manihot esculenta
Manes.05G058000 Manihot esculenta
Manes.14G137600 Manihot esculenta
Mapoly0016s0091 Marchantia polymorpha
Mapoly0020s0099 Marchantia polymorpha
MBI16_g05029_MAGBIO Magnolia biondii
MBI16_g24167_MAGBIO Magnolia biondii
MBI16_g34661_MAGBIO Magnolia biondii
MCO07G353 Micromonas commoda
MD02G1001600 Malus domestica
MD02G1001700 Malus domestica
MD02G1014400 Malus domestica
MD02G1015400 Malus domestica
MD02G1015600 Malus domestica
MD02G1015800 Malus domestica
MD02G1015900 Malus domestica
MD02G1016000 Malus domestica
MD08G1153000 Malus domestica
MD15G1129800 Malus domestica
MD15G1160700 Malus domestica
Medtr1g017780 Medicago truncatula
Medtr4g116410 Medicago truncatula
Medtr8g076830 Medicago truncatula
MELO3C011276.2 Cucumis melo
MELO3C013245.2 Cucumis melo
Migut.A00011 Erythranthe guttata
Migut.E01819 Erythranthe guttata
MSTRG.11600 Avicennia marina
MSTRG.1733 Avicennia marina
MSTRG.20951 Avicennia marina
MSTRG.26027 Avicennia marina
Nitab4.5_0000165g0120 Nicotiana tabacum
Nitab4.5_0000875g0010 Nicotiana tabacum
Nitab4.5_0002992g0020 Nicotiana tabacum
Nitab4.5_0003359g0040 Nicotiana tabacum
Nitab4.5_0003475g0040 Nicotiana tabacum
Nitab4.5_0005958g0050 Nicotiana tabacum
Nn4g26189 Nelumbo nucifera
Nn5g30709 Nelumbo nucifera
Nn6g32060 Nelumbo nucifera
Oeu010894.1 Olea europaea
Oeu041990.1 Olea europaea
Oeu041993.1 Olea europaea
Os04g0502300 Oryza sativa ssp. japonica
Os04g0613500 Oryza sativa ssp. japonica
Os04g0613600 Oryza sativa ssp. japonica
Os07g0565000 Oryza sativa ssp. japonica
Os07g0565100 Oryza sativa ssp. japonica
Os08g0207000 Oryza sativa ssp. japonica
Peaxi162Scf00116g00106 Petunia axillaris
Peaxi162Scf00172g00092 Petunia axillaris
Peaxi162Scf00355g00112 Petunia axillaris
PGR042G2693 Punica granatum
PGR044G1338 Punica granatum
PGR044G2142 Punica granatum
PGSC0003DMG400005192 Solanum tuberosum
PGSC0003DMG401005911 Solanum tuberosum
PGSC0003DMG402005911 Solanum tuberosum
PGSC0003DMG403005911 Solanum tuberosum
Phvul.002G254000 Phaseolus vulgaris
Phvul.003G173800 Phaseolus vulgaris
Phvul.003G173900 Phaseolus vulgaris
Phvul.006G060600 Phaseolus vulgaris
Phvul.011G106900 Phaseolus vulgaris
Potri.002G140400 Populus trichocarpa
Potri.014G053300 Populus trichocarpa
Potri.018G115400 Populus trichocarpa
Pp3c14_9600 Physcomitrium patens
Pp3c1_27980 Physcomitrium patens
Pp3c2_13690 Physcomitrium patens
Pp3s116_30 Physcomitrium patens
PRCOL_00003966 Prasinoderma coloniale
Prupe.1G485300 Prunus persica
Prupe.7G255900 Prunus persica
Psat0s329g0040 Pisum sativum
Psat0s4559g0040 Pisum sativum
Psat0s4559g0080 Pisum sativum
Psat0s4797g0040 Pisum sativum
Psat0s4797g0120 Pisum sativum
Psat0s7123g0040 Pisum sativum
Psat4g032840 Pisum sativum
Psat4g035320 Pisum sativum
Psat4g096200 Pisum sativum
Psat5g148960 Pisum sativum
Psat6g132800 Pisum sativum
Psat7g248640 Pisum sativum
Psat7g256160 Pisum sativum
PSO017G2301 Papaver somniferum
PSO017G2741 Papaver somniferum
PSO170G3194 Papaver somniferum
PSO478G1348 Papaver somniferum
PSO541G2097 Papaver somniferum
PSO675G3745 Papaver somniferum
QL02p020519 Quercus lobata
QL04p026309 Quercus lobata
RcHm_v2.0_Chr2g0086791 Rosa chinensis
RcHm_v2.0_Chr3g0490411 Rosa chinensis
RcHm_v2.0_Chr6g0297321 Rosa chinensis
Rhsim05G0067100 Rhododendron simsii
Rhsim05G0105400 Rhododendron simsii
Sabra02G0109700 Salix brachista
Sabra18G0098100 Salix brachista
SalBow3G3068 Salvia bowleyana
SalBow4G2704 Salvia bowleyana
SalBow6G2904 Salvia bowleyana
Sc18g0000090 Simmondsia chinensis
Sed0011082 Sechium edule
Sed0016082 Sechium edule
Sed0025503 Sechium edule
SEGI_04776 Sequoiadendron giganteum
SGA_v2.0_scaffold20G09085 Striga asiatica
SGA_v2.0_scaffold3G01653 Striga asiatica
SGA_v2.0_scaffold64G21982 Striga asiatica
SGA_v2.0_scaffold6G03432 Striga asiatica
SMO232G0127 Selaginella moellendorffii
Solyc06g073790.3 Solanum lycopersicum
Solyc06g073800.3 Solanum lycopersicum
Solyc12g042080.2 Solanum lycopersicum
Sopen06g030190 Solanum pennellii
Sopen06g030200 Solanum pennellii
Sopen12g021180 Solanum pennellii
Sp2g23480 Schrenkiella parvula
Sp4g03060 Schrenkiella parvula
Sp5g13120 Schrenkiella parvula
Sp7g28670 Schrenkiella parvula
TAR628G1329 Trochodendron aralioides
THA.LOC104808940 Tarenaya hassleriana
THA.LOC104815390 Tarenaya hassleriana
THA.LOC104826569 Tarenaya hassleriana
Thecc.01G402100 Theobroma cacao
Thecc.09G020200 Theobroma cacao
Thecc.09G140400 Theobroma cacao
Thhalv10000407m.g Eutrema salsugineum
Thhalv10005057m.g Eutrema salsugineum
Thhalv10010781m.g Eutrema salsugineum
TPR.G13136 Trifolium pratense
TPR.G21539 Trifolium pratense
TPR.G22120 Trifolium pratense
TPR.G450 Trifolium pratense
TWI23G0919 Tripterygium wilfordii
TWI34G0077 Tripterygium wilfordii
TWI59G0239 Tripterygium wilfordii
TWI63G0863 Tripterygium wilfordii
unitig_578.g16560 Utricularia gibba
unitig_8.g5049 Utricularia gibba
vmacro11207 Vaccinium macrocarpon
VMungo1080G0595 Vigna mungo
VMungo1215G2890 Vigna mungo
VMungo1309G0505 Vigna mungo
Zm00001eb070950 Zea mays
Zm00001eb078130 Zea mays
Zm00001eb430770 Zea mays

User provided reference genes

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