Gene: AT5G23740

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G23740
  • Transcript Identifier AT5G23740.1
  • Gene Type Coding gene
  • Location Chr5 : 8008251-8009330 : negative

Gene Family Information

  • ID HOM05D000894
  • #Genes/#Species 670/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G23740.1
  • symbol RPS11-BETA
  • uniprot P42733

Descriptions

  • Description ribosomal protein S11-beta
  • Computational description ribosomal protein S11-beta (RPS11-BETA); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S17, archaeal (InterPro:IPR019978), Ribosomal protein S17, conserved site (InterPro:IPR019979), Ribosomal protein S17 (InterPro:IPR000266); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT3G48930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IDA
Gene OntologymRNA binding1
GO:0003735
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IBA
Gene Ontologystructural constituent of ribosome2
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0019843
IEA
GOA DatabaserRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005829
RCA
Gene Ontologycytosol3
GO:0009536
HDA
Gene Ontologyplastid4
GO:0022627
IBA
Gene Ontologycytosolic small ribosomal subunit2
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR028333 Ribosomal protein S17, archaeal/eukaryotic
IPR000266 Ribosomal protein S17/S11
IPR032440 40S ribosomal protein S11, N-terminal
IPR012340 Nucleic acid-binding, OB-fold
Mapman id Description
17.1.3.1.12 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS11