Gene: AT4G30800

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G30800
  • Transcript Identifier AT4G30800.1
  • Gene Type Coding gene
  • Location Chr4 : 15001216-15002392 : positive

Gene Family Information

  • ID HOM05D000894
  • #Genes/#Species 670/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G30800.1
  • uniprot O65569

Descriptions

  • Description Nucleic acid-binding, OB-fold-like protein
  • Computational description Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S17, archaeal (InterPro:IPR019978), Ribosomal protein S17, conserved site (InterPro:IPR019979), Ribosomal protein S17 (InterPro:IPR000266); BEST Arabidopsis thaliana protein match is: ribosomal protein S11-beta (TAIR:AT5G23740.1); Has 1377 Blast hits to 1375 proteins in 498 species: Archae - 239; Bacteria - 304; Metazoa - 305; Fungi - 147; Plants - 148; Viruses - 0; Other Eukaryotes - 234 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IDA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IBA
Gene Ontologystructural constituent of ribosome1
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0019843
IEA
GOA DatabaserRNA binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003729
IDA
Gene OntologymRNA binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0022627
IDA
GOA Databasecytosolic small ribosomal subunit
GO:0022627
HDA
IBA
Gene Ontologycytosolic small ribosomal subunit1 3
GO:0005886
HDA
Gene Ontologyplasma membrane4
GO:0005829
RCA
Gene Ontologycytosol5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000266 Ribosomal protein S17/S11
IPR028333 Ribosomal protein S17, archaeal/eukaryotic
IPR032440 40S ribosomal protein S11, N-terminal
IPR012340 Nucleic acid-binding, OB-fold
Mapman id Description
17.1.3.1.12 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS11